DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017529
GeneRbfox2
SynonymsFbm2
Fxh
Rbm9
Desc.RNA binding protein, fox-1 homolog (C. elegans) 2
LocusNM_001110827 chr15:76909420-77137483(-)
NM_053104 chr15:76909420-77137483(-)
NM_175387 chr15:76909420-77137483(-)
NM_001110830 chr15:76909420-76984242(-)
NM_001110829 chr15:76909420-76984242(-)
NM_001110828 chr15:76909420-76984242(-)
DB links


Entrez 93686
MGI 1933973
Ensembl ENSMUSG00000033565
Featureprotein-coding
GO(BP)
  •   7 Terms
      regulation of alternative mRNA splicing, via spliceosome (GO:0000381)
      mRNA processing (GO:0006397)
      RNA splicing (GO:0008380)
      regulation of definitive erythrocyte differentiation (GO:0010724)
      intracellular estrogen receptor signaling pathway (GO:0030520)
      regulation of RNA splicing (GO:0043484)
      negative regulation of transcription, DNA-dependent (GO:0045892)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018044
(v2.0)
Rbfox2NM_001110827,NM_001110828,NM_001110829,NM_001110830,NM_001286417,NM_001286418,NM_001286419,NM_053104,NM_17538793686
3.6844355.5676107.69533.32939.669716.798348.3773114.66811.732915.4124
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017529
(v1.0)
Rbfox293686
Minor ZGA0.98138
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018044
(v2.0)
Rbfox293686
858/4200.5167462/4200.021394/4201.4156287/4200.7783309/4201.60541982/4201.6368
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018044
(v2.0)
Rbfox293686
504/1751.0091250/1750.396485/1752.4794227/1751.6924143/1751.7426855/1751.6836
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018044
(v2.0)
Rbfox293686
102.360810993.91
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018044
(v2.0)
Rbfox293686
51.37075691.73
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017529
(v1.0)
Rbfox2NM_001110827,NM_001110828,NM_001110829,NM_001110830,NM_053104,NM_17538793686
57.769974.527324.79976.6883633.9072
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017529
(v1.0)
Rbfox2FR241070,NM_001110827,NM_001110828,NM_001110829,NM_001110830,NM_053104,NM_17538793686
578.279801.4164.06544.6354116.477
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017529
(v1.0)
Rbfox2NM_001110827,NM_001110828,NM_001110829,NM_001110830,NM_053104,NM_17538793686
60.40371.2273681.3109
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017529
(v1.0)
Rbfox2NM_001110827,NM_001110828,NM_001110829,NM_001110830,NM_053104,NM_17538793686
58.9673.77984.9181
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017529
(v1.0)
Rbfox2FR241070,NM_001110827,NM_001110828,NM_001110829,NM_001110830,NM_053104,NM_17538793686
2445.083663.37
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017529
(v1.0)
Rbfox2NM_001110827,NM_001110828,NM_001110829,NM_001110830,NM_053104,NM_17538793686
60.43881.2105593.1353
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017529
(v1.0)
Rbfox2NM_001110827,NM_001110828,NM_001110829,NM_001110830,NM_053104,NM_17538793686
22.96076.457888.13405
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017529
(v1.0)
Rbfox2NM_001110827,NM_001110828,NM_001110829,NM_001110830,NM_053104,NM_17538793686
135.645123.92
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017529
(v1.0)
Rbfox2NM_001110827,NM_001110828,NM_001110829,NM_001110830,NM_053104,NM_17538793686
38.22717.01051
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017529
(v1.0)
Rbfox2NM_001110827,NM_001110828,NM_001110829,NM_001110830,NM_053104,NM_17538793686
5.613824.63029
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017529
(v1.0)
1418245_a_atMm.202774Rbfox2NM_053104.5,NM_001110827.1,NM_175387.3,NM_001110828.1,NM_001110829.1,NM_001110830.193686
143.1216.485.35075.025
0017529
(v1.0)
1434938_atMm.202774Rbfox2NM_053104.5,NM_001110827.1,NM_175387.3,NM_001110828.1,NM_001110829.1,NM_001110830.193686
280.8273.225299.025221.875101.675
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017529
(v1.0)
A_52_P310530Rbm9NM_05310493686
11P0.7260.193P
Proteome N/A