DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017536
GeneRbm12
SynonymsSWAN
Desc.RNA binding motif protein 12
LocusNM_170598 chr2:155920618-155937701(-)
NM_029397 chr2:155920618-155937701(-)
DB links


Entrez 75710
MGI 1922960
Ensembl ENSMUSG00000089824
Vega OTTMUSG00000016088
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018051
(v2.0)
Rbm12NM_029397,NM_170588,NM_170590,NM_17059875710
16.258928.560930.464458.571157.498129.930421.640823.199844.59824.9664
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017536
(v1.0)
Rbm12Major ZGA0.99678
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018051
(v2.0)
Rbm1275710
463/2040.667323/2040.5445122/2042.7878395/2042.270511/204-2.058873/204-2.0594
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018051
(v2.0)
Rbm1275710
299/1230.7639179/1230.4221119/1233.4297369/1232.89097/123-1.932850/123-1.8666
SPR_Methy_Kobayashi_+-5KfromTSS N/A
SPR_Methy_Kobayashi_+-2KfromTSS N/A
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017536
(v1.0)
Rbm12NM_029397,NM_170588,NM_170590,NM_17059875710
29.704821.170643.624939.793415.1816
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017536
(v1.0)
Rbm12FR113403,FR299030,NM_029397,NM_170588,NM_170590,NM_17059875710
322.865174.854259.661262.705118.668
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017536
(v1.0)
Rbm12NM_029397,NM_170588,NM_170590,NM_17059875710
31.05915.9462123.0976
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017536
(v1.0)
Rbm12NM_029397,NM_170588,NM_170590,NM_17059875710
30.316820.95817.1983
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017536
(v1.0)
Rbm12FR113403,FR299030,NM_029397,NM_170588,NM_170590,NM_17059875710
161.42196.242
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017536
(v1.0)
Rbm12NM_029397,NM_170588,NM_170590,NM_17059875710
31.07725.8647718.8625
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017536
(v1.0)
Rbm12NM_029397,NM_170588,NM_170590,NM_17059875710
40.389938.422230.7915
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017536
(v1.0)
Rbm12FR113403,FR299030,NM_029397,NM_170588,NM_170590,NM_17059875710
233.916170.303
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017536
(v1.0)
Rbm12NM_029397,NM_170588,NM_170590,NM_17059875710
26.061136.265
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017536
(v1.0)
Rbm12NM_029397,NM_170588,NM_170590,NM_17059875710
3.262226.20833
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017536
(v1.0)
4238C0924B02-3Mm.132804U023551NAP001143-001Rbm12;TC842904Q9CS80U,F,22.96912.93323.06032.9253.02223.00782.9652
0017536
(v1.0)
13961J0243B05-3Mm.200685Rbm1275710
U023551NAP001143-001Rbm12;TC905922,TC905921,TC842905,TC842904Q9CS80U,F,23.52493.28582.83663.36472.49562.78662.792
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017536
(v1.0)
1416928_atMm.27660Rbm12NM_029397.3,NM_170598.2,NM_170588.3,NM_170590.375710
139.525138.425119.65117.175126.35
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017536
(v1.0)
A_51_P276652Rbm12NM_02939775710
11P0.6290.176P
Proteome N/A