DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017550
GeneRbm27
SynonymsPsc1
Desc.RNA binding motif protein 27
LocusNM_172626 chr18:42435007-42501194(+)
DB links


Entrez 225432
MGI 2147194
Ensembl ENSMUSG00000024491
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018066
(v2.0)
Rbm27NM_172626225432
5.2161447.244894.5971108.29364.23997.8732710.339681.662450.78648.04366
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017550
(v1.0)
Rbm27225432
Major ZGA0.9919
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018066
(v2.0)
Rbm27225432
535/3250.2057383/3250.1203134/3252.2807312/3251.265953/325-0.55366/325-0.4264
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018066
(v2.0)
Rbm27225432
290/1570.3704159/157-0.0973125/1573.1763297/1572.232920/157-0.8823102/157-1.2094
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018066
(v2.0)
Rbm27225432
30.795912424.84
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018066
(v2.0)
Rbm27225432
10.368910210.17
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017550
(v1.0)
Rbm27NM_172626225432
49.109265.306480.577344.49077.31416
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017550
(v1.0)
Rbm27NM_172626225432
97.0997180.045213.008124.35719.5161
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017550
(v1.0)
Rbm27NM_172626225432
51.34821.907671.2507
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017550
(v1.0)
Rbm27NM_172626225432
50.120964.650660.4701
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017550
(v1.0)
Rbm27NM_172626225432
566.848288.479
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017550
(v1.0)
Rbm27NM_172626225432
51.3781.8814766.3216
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017550
(v1.0)
Rbm27NM_172626225432
74.60242.957535.12
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017550
(v1.0)
Rbm27NM_172626225432
123.011189.828
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017550
(v1.0)
Rbm27NM_172626225432
108.83577.7642
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017550
(v1.0)
Rbm27NM_172626225432
9.9146321.9689
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017550
(v1.0)
1456058_atMm.329400Rbm27NM_172626.2225432
602.25914.4792.575394.35441.5
0017550
(v1.0)
1458748_atMm.329400Rbm27NM_172626.2225432
314.175379.8000
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017550
(v1.0)
A_52_P178048Rbm27AK087759225432
11P0.6610.151P
0017550
(v1.0)
A_52_P54297Rbm27AY461716225432
11P1.0350.79P
Proteome N/A