DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017551
GeneRbm28
Synonyms
Desc.RNA binding motif protein 28
LocusNM_133925 chr6:29073573-29114724(-)
DB links


Entrez 68272
MGI 2655711
Ensembl ENSMUSG00000029701
Vega OTTMUSG00000035837
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Ribosome biogenesis in eukaryotes (mmu03008)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018067
(v2.0)
Rbm28NM_13392568272
8.8886717.70837.4287842.782352.640913.166313.19297.9023840.65413.5261
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017551
(v1.0)
Rbm2868272
MGA0.94056
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018067
(v2.0)
Rbm2868272
745/4710.1484565/4710.146802/4714.3342415/4713.6824157/4710.4693890/4710.3181
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018067
(v2.0)
Rbm2868272
379/2120.3239320/2120.4759752/2125.34942113/2124.632131/212-0.6982196/212-0.7082
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018067
(v2.0)
Rbm2868272
63.069513048.52
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018067
(v2.0)
Rbm2868272
17.01337722.1
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017551
(v1.0)
Rbm28NM_13392568272
18.40455.1584831.851436.47729.35419
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017551
(v1.0)
Rbm28FR030670,NM_13392568272
287.33876.8697478.118542.473114.364
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017551
(v1.0)
Rbm28NM_13392568272
19.24363.250685.62801
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017551
(v1.0)
Rbm28NM_13392568272
18.78365.106685.85989
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017551
(v1.0)
Rbm28FR030670,NM_13392568272
271.594300.666
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017551
(v1.0)
Rbm28NM_13392568272
19.25473.206156.42693
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017551
(v1.0)
Rbm28NM_13392568272
29.489435.220228.1045
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017551
(v1.0)
Rbm28FR030670,NM_13392568272
659.181518.603
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017551
(v1.0)
Rbm28NM_13392568272
7.5417914.1845
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017551
(v1.0)
Rbm28NM_13392568272
2.812281.93927
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017551
(v1.0)
1452091_a_atMm.40802Rbm28NM_133925.268272
572.65597.7491.95630.55416.85
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017551
(v1.0)
A_51_P437786Rbm28NM_02665068272
11P0.8970.474P
0017551
(v1.0)
A_51_P437787Rbm28NM_02665068272
11P1.1710.359P
0017551
(v1.0)
A_52_P26976Rbm28BC04081168272
11P0.2290.0434P
Proteome N/A