DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017560
GeneRbm42
Synonyms
Desc.RNA binding motif protein 42
LocusNM_133693 chr7:31426014-31435247(-)
DB links


Entrez 68035
MGI 1915285
Ensembl ENSMUSG00000036733
Vega OTTMUSG00000026179
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018077
(v2.0)
Rbm42NM_13369368035
33.281454.106619.7687122.458131.39130.38215.353726.872986.909731.6891
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017560
(v1.0)
Rbm4268035
Major ZGA0.96737
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018077
(v2.0)
Rbm4268035
665/4380.0894375/438-0.339475/4381.0348251/4380.525528/438-1.8727178/438-1.8895
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018077
(v2.0)
Rbm4268035
217/1410.1084145/141-0.075353/1412.0973170/1411.58414/141-2.801860/141-1.8062
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018077
(v2.0)
Rbm4268035
73.019313056.17
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018077
(v2.0)
Rbm4268035
16.42397222.81
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017560
(v1.0)
Rbm42NM_13369368035
56.25313.711191.029990.743110.9525
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017560
(v1.0)
Rbm42FR140280,FR303062,NM_027999,NM_13369368035
495.04219.399593.022608.075111.038
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017560
(v1.0)
Rbm42NM_13369368035
58.817712.171314.9591
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017560
(v1.0)
Rbm42NM_13369368035
57.411913.573420.0091
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017560
(v1.0)
Rbm42FR140280,FR303062,NM_027999,NM_13369368035
256.426394.148
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017560
(v1.0)
Rbm42NM_13369368035
58.851812.004621.9453
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017560
(v1.0)
Rbm42NM_13369368035
84.279587.616160.3183
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017560
(v1.0)
Rbm42FR140280,FR303062,NM_027999,NM_13369368035
584.913427.294
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017560
(v1.0)
Rbm42NM_13369368035
71.347250.8936
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017560
(v1.0)
Rbm42NM_13369368035
24.033713.2298
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017560
(v1.0)
11703H3121G02-3Mm.218193100004P22Rik68035
U028396NAP005579-0013100004P22Rik;TC903598,TC903596,TC903593,TC903591,TC903590,TC903587,TC903586,TC903584,TC903583Q91V81U,F,23.95333.91614.31864.96084.40284.594.337
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017560
(v1.0)
1460641_a_atMm.401747Rbm42NM_133693.268035
00130.47500
0017560
(v1.0)
1415739_atMm.401747Rbm42NM_133693.268035
1390.4760.2751734.6251374.0751431.55
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017560
(v1.0)
A_51_P2020033100004P22RikNM_13369368035
11P0.7870.251P
Proteome N/A