DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017602
GeneRcl1
SynonymsRnac
RPCL1
Desc.RNA terminal phosphate cyclase-like 1
LocusNM_021525 chr19:29175865-29218333(+)
DB links


Entrez 59028
MGI 1913275
Ensembl ENSMUSG00000024785
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Ribosome biogenesis in eukaryotes (mmu03008)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018120
(v2.0)
Rcl1NM_02152559028
11.289.5818111.618682.223898.508223.251716.837516.104381.274728.3142
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017602
(v1.0)
Rcl159028
Major ZGA0.98825
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018120
(v2.0)
Rcl159028
550/3850.0018378/385-0.142398/3851.5969258/3850.7587/385-0.087509/385-0.196
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018120
(v2.0)
Rcl159028
307/1760.2884164/176-0.216895/1762.6304248/1761.811458/1760.4473309/1760.2116
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018120
(v2.0)
Rcl159028
49.591414434.44
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018120
(v2.0)
Rcl159028
14.299710713.36
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017602
(v1.0)
Rcl1NM_02152559028
9.95668.0349961.14468.388812.1681
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017602
(v1.0)
Rcl1NM_02152559028
12.54689.3602887.6499100.24518.6077
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017602
(v1.0)
Rcl1NM_02152559028
10.41054.125218.76635
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017602
(v1.0)
Rcl1NM_02152559028
10.16177.9543211.9141
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017602
(v1.0)
Rcl1NM_02152559028
9.4119613.8647
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017602
(v1.0)
Rcl1NM_02152559028
10.41664.0687113.067
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017602
(v1.0)
Rcl1NM_02152559028
56.609866.032156.4141
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017602
(v1.0)
Rcl1NM_02152559028
98.497588.9182
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017602
(v1.0)
Rcl1NM_02152559028
8.8041220.7621
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017602
(v1.0)
Rcl1NM_02152559028
3.205242.26134
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017602
(v1.0)
4896G0111H09-3Mm.28630Rnac-pending59028
U019342NAP005683-001Rnac;TC892758Q9JJT0U,F,23.26353.29093.61383.74053.26953.51213.3197
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017602
(v1.0)
1416730_atMm.28630Rcl1NM_021525.259028
280.65190.5432.075577.075285.3
Agilent44K N/A
Proteome N/A