DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017604
GeneRcn2
Synonymstaipoxin-associated calcium binding protein 49
TCBP-49
Desc.reticulocalbin 2
LocusNM_011992 chr9:55889652-55906890(+)
DB links


Entrez 26611
MGI 1349765
Ensembl ENSMUSG00000032320
Vega OTTMUSG00000027450
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018122
(v2.0)
Rcn2NM_001278274,NM_01199226611
23.211585.534524.984824.325914.617827.506154.714812.925320.890822.1236
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017604
(v1.0)
Rcn226611
Maternal RNA0.99062
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018122
(v2.0)
Rcn226611
462/324-0.0009376/3240.0982214/3242.9564453/3241.806896/3240.2994508/3240.0493
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018122
(v2.0)
Rcn226611
209/1330.1383147/1330.028205/1334.1063421/1332.97018/133-1.87279/133-1.3343
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018122
(v2.0)
Rcn226611
47.94259550.47
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018122
(v2.0)
Rcn226611
8.00035215.39
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017604
(v1.0)
Rcn2NM_01199226611
88.696417.041117.3929.7747337.7025
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017604
(v1.0)
Rcn2NM_01199226611
147.91621.960626.728917.048365.168
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017604
(v1.0)
Rcn2NM_01199226611
92.74038.1699218.5922
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017604
(v1.0)
Rcn2NM_01199226611
90.523716.879.35915
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017604
(v1.0)
Rcn2NM_01199226611
93.602634.4226
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017604
(v1.0)
Rcn2NM_01199226611
92.79428.0580310.2648
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017604
(v1.0)
Rcn2NM_01199226611
16.10239.4378913.2116
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017604
(v1.0)
Rcn2NM_01199226611
48.988861.2591
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017604
(v1.0)
Rcn2NM_01199226611
21.89848.62094
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017604
(v1.0)
Rcn2NM_01199226611
49.5158100.786
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017604
(v1.0)
5705H3006A07-3Mm.1782Rcn226611
U010523NAP007248-001Rcn2;TC874904O70341U,F,23.57623.23542.89142.64392.31042.48592.8014
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017604
(v1.0)
1422449_s_atMm.1782Rcn2NM_011992.226611
1068.551433.55439128.85265.55
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017604
(v1.0)
A_51_P165041Rcn2NM_01199226611
11P0.4420.0811P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017604
(v1.0)
Rcn226611
5621175