DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017667
GeneRest
SynonymsNRSF
Desc.RE1-silencing transcription factor
LocusNM_011263 chr5:77694519-77712722(+)
DB links


Entrez 19712
MGI 104897
Ensembl ENSMUSG00000029249
Vega OTTMUSG00000021414
Featureprotein-coding
GO(BP)
  •   24 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      negative regulation of cell proliferation (GO:0008285)
      negative regulation of gene expression (GO:0010629)
      negative regulation of aldosterone biosynthetic process (GO:0032348)
      cellular response to drug (GO:0035690)
      positive regulation of apoptotic process (GO:0043065)
      positive regulation of cysteine-type endopeptidase activity involved in apoptotic process (GO:0043280)
      negative regulation by host of viral transcription (GO:0043922)
      negative regulation of neuron differentiation (GO:0045665)
      negative regulation of transcription, DNA-dependent (GO:0045892)
      positive regulation of transcription, DNA-dependent (GO:0045893)
      negative regulation of calcium ion-dependent exocytosis (GO:0045955)
      negative regulation of insulin secretion (GO:0046676)
      negative regulation of neurogenesis (GO:0050768)
      cardiac muscle cell myoblast differentiation (GO:0060379)
      histone H4 deacetylation (GO:0070933)
      cellular response to electrical stimulus (GO:0071257)
      cellular response to glucocorticoid stimulus (GO:0071385)
      negative regulation of cortisol biosynthetic process (GO:2000065)
      negative regulation of dense core granule biogenesis (GO:2000706)
      negative regulation of mesenchymal stem cell differentiation (GO:2000740)
      negative regulation of amniotic stem cell differentiation (GO:2000798)
GO(MF)
  •   14 Terms
      core promoter sequence-specific DNA binding (GO:0001046)
      core promoter binding (GO:0001047)
      RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription (GO:0001078)
      nucleic acid binding (GO:0003676)
      DNA binding (GO:0003677)
      chromatin binding (GO:0003682)
      sequence-specific DNA binding transcription factor activity (GO:0003700)
      protein binding (GO:0005515)
      transcription factor binding (GO:0008134)
      zinc ion binding (GO:0008270)
      outward rectifier potassium channel activity (GO:0015271)
      protein complex binding (GO:0032403)
      transcription regulatory region DNA binding (GO:0044212)
      metal ion binding (GO:0046872)
GO(CC)
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018187
(v2.0)
RestNM_01126319712
6.627364.3897115.995124.002117.18426.465222.5083117.108110.68513.6931
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017667
(v1.0)
Rest19712
2-Cell Transient0.86946
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018187
(v2.0)
Rest19712
754/3480.6012491/3480.3795102/3481.7952274/3480.981240/348-1.0448387/348-0.4446
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018187
(v2.0)
Rest19712
405/1311.1096265/1310.895197/1313.0545252/1312.253414/131-1.1139135/131-0.5508
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018187
(v2.0)
Rest19712
95.788519249.89
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018187
(v2.0)
Rest19712
19.0759619.87
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017667
(v1.0)
RestNM_01126319712
66.936780.598692.356781.266215.7727
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017667
(v1.0)
RestNM_01126319712
80.90388.57105.74994.546218.203
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017667
(v1.0)
RestNM_01126319712
69.98852.4236787.9349
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017667
(v1.0)
RestNM_01126319712
68.315779.789486.6986
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017667
(v1.0)
RestNM_01126319712
89.928597.7049
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017667
(v1.0)
RestNM_01126319712
70.02912.3904795.088
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017667
(v1.0)
RestNM_01126319712
85.507978.465876.5648
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017667
(v1.0)
RestNM_01126319712
93.52590.7968
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017667
(v1.0)
RestNM_01126319712
66.22437.7326
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017667
(v1.0)
RestNM_01126319712
28.651325.9373
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017667
(v1.0)
753C0139B10-3Mm.288402610008J04Rik72127
U042648NAP104429-1Rest;TC853758Q60694U,F,24.29274.44413.77983.72253.75693.92753.8667
0017667
(v1.0)
19589L0283E03-3Mm.117547Rest19712
U042648NAP095075-001Rest;TC853759,TC853758Q60694U,F,23.50493.50293.15913.20512.60423.27173.0514
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017667
(v1.0)
1428227_atMm.482359RestNM_011263.219712
315.15303.6809.275946.975688.95
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017667
(v1.0)
A_51_P103229RestAK01134919712
11P0.7120.185P
0017667
(v1.0)
A_52_P31687RestNM_01126319712
11P1.280.245P
Proteome N/A