DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017681
GeneRfc2
Synonyms40kDa
Recc2
Desc.replication factor C (activator 1) 2
LocusNM_020022 chr5:135058560-135074198(+)
DB links


Entrez 19718
MGI 1341868
Ensembl ENSMUSG00000023104
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018201
(v2.0)
Rfc2NM_02002219718
37.68427.905511.30764.1745511.247614.07837.995213.222811.11619.1478
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017681
(v1.0)
Rfc219718
Maternal RNA0.93657
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018201
(v2.0)
Rfc219718
590/3910.0805375/391-0.176348/3913.3931013/3912.696829/391-1.6616201/391-1.5522
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018201
(v2.0)
Rfc219718
283/1510.3912186/1510.1834335/1514.6435936/1513.940910/151-1.760475/151-1.5896
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018201
(v2.0)
Rfc219718
76.284611268.11
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018201
(v2.0)
Rfc219718
22.07335540.13
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017681
(v1.0)
Rfc2NM_02002219718
29.01137.905823.110367.8017327.1153
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017681
(v1.0)
Rfc2NM_02002219718
151.48323.41949.5505928.456597.9991
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017681
(v1.0)
Rfc2NM_02002219718
30.33413.78148.62543
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017681
(v1.0)
Rfc2NM_02002219718
29.6097.826449.78139
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017681
(v1.0)
Rfc2NM_02002219718
44.561166.1019
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017681
(v1.0)
Rfc2NM_02002219718
30.351613.592710.7279
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017681
(v1.0)
Rfc2NM_02002219718
2.879717.532887.67129
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017681
(v1.0)
Rfc2NM_02002219718
47.567159.1938
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017681
(v1.0)
Rfc2NM_02002219718
6.154673.49387
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017681
(v1.0)
Rfc2NM_02002219718
0.1591670.0821257
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017681
(v1.0)
18548L0214A01-3Mm.27855Rfc219718
U006267NAP004021-001Limk1;Rfc2;TC880850Q99K913.66463.64223.64043.70934.15913.9994.1677
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017681
(v1.0)
1417503_atMm.332739Rfc2NM_020022.219718
0000423.825
0017681
(v1.0)
1457638_x_atMm.332739Rfc2NM_020022.219718
263.2750196.2250471.85
0017681
(v1.0)
1457669_x_atMm.332739Rfc2NM_020022.219718
433.1750110.75232.75842
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017681
(v1.0)
A_51_P254912Rfc2NM_02002219718
11P1.3580.275P
0017681
(v1.0)
A_52_P981680Rfc2NM_02002219718
11P1.4040.184P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017681
(v1.0)
Rfc219718
210210