DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017688
GeneRfng
Synonymsradical fringe
DescriptionRFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
LocusNM_009053 UCSC: chr11:120642059-120645518(-) OLP: chr11:120642059-120645518(-)
DB links


Entrez 19719
MGI 894275
Ensembl ENSMUSG00000025158
Vega OTTMUSG00000004135
Featureprotein-coding
GO_BP
GO_MF
  •   4 Terms
      transferase activity (GO:0016740)
      transferase activity, transferring glycosyl groups (GO:0016757)
      O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity (GO:0033829)
      metal ion binding (GO:0046872)
GO_CC
KEGG
  •   2 Terms
      Other types of O-glycan biosynthesis (mmu00514)
      Notch signaling pathway (mmu04330)
Ver2_FPKM see DBTMEE:2018208 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017688
(v1.0)		RfngNM_00905319719
6.766364.071858.559149.810442.19149
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017688
(v1.0)		RfngNM_00905319719
7.074853.484894.44247
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017688
(v1.0)		RfngNM_00905319719
6.905754.030967.00639
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017688
(v1.0)		RfngNM_00905319719
7.078963.437167.68438
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017688
(v1.0)		RfngNM_00905319719
7.924439.472378.84534
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017688
(v1.0)		RfngNM_00905319719
4.047899.58059
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017688
(v1.0)		RfngNM_00905319719
1.694361.86129
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017688
(v1.0)		5171AF015770.1Mm.871Rfng19719
U033734NAP008015-001Rfng;TC826743,TC826741O090091.8681.99431.69951.97012.26551.84172.2264
0017688
(v1.0)		13577J0057D07-3Mm.871Rfng19719
U033734NAP008015-001Rfng;TC826741O090093.63563.58243.8094.02964.00733.99993.9383
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017688
(v1.0)		1460704_atMm.871RfngNM_009053.219719
000212.650
Agilent44K N/A
Proteome N/A