DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017690
GeneRfpl4
SynonymsD7Ertd486e
Desc.ret finger protein-like 4
LocusNM_001145013 chr7:5061389-5068513(-)
NM_138954 chr7:5061389-5068513(-)
DB links


Entrez 192658
MGI 2149590
Ensembl ENSMUSG00000035191
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018210
(v2.0)
Rfpl4NM_001145013,NM_138954192658
01289.543364.54183.59729.16400.3858652389.9253.38250
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017690
(v1.0)
Rfpl4192658
Minor ZGA0.99562
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018210
(v2.0)
Rfpl4192658
511/408-0.1876357/408-0.30815/408-1.113641/408-1.9577169/4080.78011379/4081.1557
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018210
(v2.0)
Rfpl4192658
238/195-0.2241173/195-0.28735/195-1.508416/195-2.207182/1950.795672/1951.1815
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018210
(v2.0)
Rfpl4192658
57.96146195.02
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018210
(v2.0)
Rfpl4192658
33.53163595.8
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017690
(v1.0)
Rfpl4NM_001145013,NM_138954192658
1340.462328.33136.89120.21510.266268
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017690
(v1.0)
Rfpl4NM_001145013,NM_138954192658
3415.14837.53311.45553.37481.1561
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017690
(v1.0)
Rfpl4NM_001145013,NM_138954192658
1401.5702540.26
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017690
(v1.0)
Rfpl4NM_001145013,NM_138954192658
1368.072304.951766.43
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017690
(v1.0)
Rfpl4NM_001145013,NM_138954192658
4890.874901.24
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017690
(v1.0)
Rfpl4NM_001145013,NM_138954192658
1402.3901937.36
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017690
(v1.0)
Rfpl4NM_001145013,NM_138954192658
126.7419.518537.3007
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017690
(v1.0)
Rfpl4NM_001145013,NM_138954192658
54.737489.0936
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017690
(v1.0)
Rfpl4NM_001145013,NM_138954192658
575.91994.0266
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017690
(v1.0)
Rfpl4NM_001145013,NM_138954192658
958.0421211.09
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017690
(v1.0)
8444H3066B07-3Rfpl4192658
U028105NAP016277-001Rfpl4;TC854244U,F,23.74714.05783.38252.80662.96892.99862.9528
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017690
(v1.0)
1416650_atMm.28764Rfpl4NM_138954.3,NM_001145013.1192658
2985.84734.6251507.67500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017690
(v1.0)
A_51_P400976Rfpl4NM_138954192658
11P0.9190.553P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017690
(v1.0)
Rfpl4192658
042087