DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017698
GeneRfx2
Synonyms
Desc.regulatory factor X, 2 (influences HLA class II expression)
LocusNM_009056 chr17:56915320-56970431(-)
NM_027787 chr17:56915320-56970431(-)
DB links


Entrez 19725
MGI 106583
Ensembl ENSMUSG00000024206
Featureprotein-coding
GO(BP)
  •   2 Terms
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018218
(v2.0)
Rfx2NM_009056,NM_02778719725
62.264618.145416.23957.55525.164416.835630.79085630.36714.977056.56347
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017698
(v1.0)
Rfx219725
Maternal RNA0.9775
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018218
(v2.0)
Rfx219725
590/416-0.0087362/416-0.3159195/4162.4739653/4161.975375/416-0.4091658/4160.062
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018218
(v2.0)
Rfx219725
273/1600.2565132/160-0.3909179/1603.6655595/1603.20640/1600.0563252/1600.0557
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018218
(v2.0)
Rfx219725
58.388415836.95
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018218
(v2.0)
Rfx219725
19.839811517.25
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017698
(v1.0)
Rfx2NM_009056,NM_02778719725
18.87711.27015.628083.588530.538674
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017698
(v1.0)
Rfx2NM_009056,NM_02778719725
119.34788.308922.521229.81123.94277
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017698
(v1.0)
Rfx2NM_009056,NM_02778719725
19.737722.771312.2959
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017698
(v1.0)
Rfx2NM_009056,NM_02778719725
19.265911.15722.5322
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017698
(v1.0)
Rfx2NM_009056,NM_02778719725
108.572141.017
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017698
(v1.0)
Rfx2NM_009056,NM_02778719725
19.749122.459524.7126
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017698
(v1.0)
Rfx2NM_009056,NM_02778719725
5.210723.464863.46473
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017698
(v1.0)
Rfx2NM_009056,NM_02778719725
30.312330.7122
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017698
(v1.0)
Rfx2NM_009056,NM_02778719725
4.494538.0158
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017698
(v1.0)
Rfx2NM_009056,NM_02778719725
0.2723381.3525
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017698
(v1.0)
1387C0205C03-3Mm.216100U037958NAP104544-1Rfx2;P48379U,F,22.72692.71852.83842.9862.5192.62392.651
0017698
(v1.0)
14719J0804C12-3Mm.102Rfx219725
U037958NAP099186-001Rfx2;TC848943P48379U,F,23.6413.57823.57583.48673.80473.65383.7746
MOE430 N/A
Agilent44K N/A
Proteome N/A