DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017706
GeneRfxap
Synonyms
Desc.regulatory factor X-associated protein
LocusNM_133231 chr3:54607037-54611713(-)
DB links


Entrez 170767
MGI 2180854
Ensembl ENSMUSG00000036615
Featureprotein-coding
GO(BP)
  •   1 Terms
      positive regulation of transcription, DNA-dependent (GO:0045893)
GO(MF)
GO(CC)
KEGG
  •   2 Terms
      Antigen processing and presentation (mmu04612)
      Primary immunodeficiency (mmu05340)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018226
(v2.0)
RfxapNM_133231170767
4.224895.406335.131128.637465.114313.055862.919776.271285.684792.81722
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017706
(v1.0)
Rfxap170767
2-Cell Transient0.97986
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018226
(v2.0)
Rfxap170767
696/3890.3258484/3890.1986282/3893.0978892/3892.5209111/3890.2462563/389-0.0658
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018226
(v2.0)
Rfxap170767
417/2010.5378277/2010.345270/2013.9476703/2013.121730/201-0.6686249/201-0.2888
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018226
(v2.0)
Rfxap170767
49.611618526.82
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018226
(v2.0)
Rfxap170767
17.00312913.18
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017706
(v1.0)
RfxapNM_133231170767
5.618593.564556.431883.546532.05086
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017706
(v1.0)
RfxapNM_133231170767
7.89887.9707116.715316.476.01065
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017706
(v1.0)
RfxapNM_133231170767
5.874751.545083.889
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017706
(v1.0)
RfxapNM_133231170767
5.734333.528764.65322
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017706
(v1.0)
RfxapNM_133231170767
4.054015.21666
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017706
(v1.0)
RfxapNM_133231170767
5.878161.523925.10349
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017706
(v1.0)
RfxapNM_133231170767
5.954923.424313.91137
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017706
(v1.0)
RfxapNM_133231170767
16.291310.5028
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017706
(v1.0)
RfxapNM_133231170767
0.9129551.65707
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017706
(v1.0)
RfxapNM_133231170767
4.648372.56384
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017706
(v1.0)
1418859_atMm.185735RfxapNM_133231.2170767
177.125152.475390.775163.925101.375
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017706
(v1.0)
A_51_P124477RfxapNM_133231170767
11P1.0350.788P
Proteome N/A