DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017758
GeneRhoa
SynonymsArha
Arha1
Arha2
RhoA
Desc.ras homolog gene family, member A
LocusNM_016802 chr9:108208536-108240270(+)
DB links


Entrez 11848
MGI 1096342
Ensembl ENSMUSG00000007815
Featureprotein-coding
GO(BP)
  •   38 Terms
      cell morphogenesis (GO:0000902)
      GTP catabolic process (GO:0006184)
      regulation of transcription from RNA polymerase II promoter (GO:0006357)
      cell cycle (GO:0007049)
      cell adhesion (GO:0007155)
      cell-matrix adhesion (GO:0007160)
      integrin-mediated signaling pathway (GO:0007229)
      small GTPase mediated signal transduction (GO:0007264)
      Rho protein signal transduction (GO:0007266)
      skeletal muscle tissue development (GO:0007519)
      actin cytoskeleton organization (GO:0030036)
      cell differentiation (GO:0030154)
      positive regulation of cell growth (GO:0030307)
      regulation of cell migration (GO:0030334)
      androgen receptor signaling pathway (GO:0030521)
      positive regulation of actin filament polymerization (GO:0030838)
      stress-activated protein kinase signaling cascade (GO:0031098)
      negative regulation of intracellular steroid hormone receptor signaling pathway (GO:0033144)
      regulation of osteoblast proliferation (GO:0033688)
      cleavage furrow formation (GO:0036089)
      response to drug (GO:0042493)
      negative regulation of I-kappaB kinase/NF-kappaB cascade (GO:0043124)
      stress fiber assembly (GO:0043149)
      positive regulation of cysteine-type endopeptidase activity involved in apoptotic process (GO:0043280)
      apical junction assembly (GO:0043297)
      negative regulation of neuron apoptotic process (GO:0043524)
      positive regulation of neuron apoptotic process (GO:0043525)
      ossification involved in bone maturation (GO:0043931)
      negative regulation of neuron differentiation (GO:0045665)
      positive regulation of neuron differentiation (GO:0045666)
      regulation of dendrite development (GO:0050773)
      cell division (GO:0051301)
      positive regulation of stress fiber assembly (GO:0051496)
      regulation of calcium ion transport (GO:0051924)
      trabecula morphogenesis (GO:0061383)
      positive regulation of cell cycle cytokinesis (GO:0071777)
      positive regulation of podosome assembly (GO:0071803)
      spindle assembly involved in mitosis (GO:0090307)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018278
(v2.0)
RhoaNM_01680211848
145.71345.629561.322122.973214.269149.056133.9252.0589185.725143.505
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017758
(v1.0)
Rhoa11848
MGA0.99302
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018278
(v2.0)
Rhoa11848
655/4370.0709467/437-0.0204160/4372.121455/4371.38449/437-3.4055122/437-2.4256
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018278
(v2.0)
Rhoa11848
335/1810.3735202/1810.0419144/1813.1875372/1812.35463/181-3.474958/181-2.212
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018278
(v2.0)
Rhoa11848
51.84439852.9
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018278
(v2.0)
Rhoa11848
15.49066025.82
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017758
(v1.0)
RhoaNM_01680211848
47.442842.362391.5392148.67593.7953
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017758
(v1.0)
RhoaFR256937,NM_01680211848
24.017220.140146.390478.726835.4384
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017758
(v1.0)
RhoaNM_01680211848
49.605853.288646.2182
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017758
(v1.0)
RhoaNM_01680211848
48.420241.93738.5928
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017758
(v1.0)
RhoaFR256937,NM_01680211848
20.453117.7435
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017758
(v1.0)
RhoaNM_01680211848
49.634752.558742.3273
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017758
(v1.0)
RhoaNM_01680211848
84.751143.552128.403
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017758
(v1.0)
RhoaFR256937,NM_01680211848
77.876664.3196
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017758
(v1.0)
RhoaNM_01680211848
62.7486178.175
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017758
(v1.0)
RhoaNM_01680211848
2.6126117.6649
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017758
(v1.0)
5432NM_016802.1Mm.757Arha211848
U011020NAP094002-001TC885993,TC885992,TC885991Q9QUI0U,F,23.06762.91793.0792.97963.40583.14883.2547
0017758
(v1.0)
8903H3074A08-3Mm.757Arha211848
U011020NAP094002-001Arha2;TC885992Q9QUI0U,F,22.92883.03693.46513.90453.4463.65853.257
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017758
(v1.0)
1450632_atMm.757RhoaNM_016802.411848
77.1593.25432.475497.65449.2
0017758
(v1.0)
1437628_s_atMm.757RhoaNM_016802.411848
172.1250923.251466.1751077.6
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017758
(v1.0)
A_52_P110965RhoaNM_01680211848
11P0.5390.141P
0017758
(v1.0)
A_52_P428496RhoaNM_01680211848
11P0.9580.744P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017758
(v1.0)
Rhoa11848
8129275144