DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017771
GeneRhot2
SynonymsArht2
Miro2
Desc.ras homolog gene family, member T2
LocusNM_145999 chr17:25975783-25981796(-)
DB links


Entrez 214952
MGI 2384892
Ensembl ENSMUSG00000025733
Vega OTTMUSG00000042160
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018291
(v2.0)
Rhot2NM_001163766,NM_145999214952
15.158539.446963.082613.816617.809521.65424.922994.577417.197820.426
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017771
(v1.0)
Rhot2Minor ZGA0.98092
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018291
(v2.0)
Rhot2214952
854/5190.2053397/519-0.5016405/5193.2135897/5192.115323/519-2.3884323/519-1.2796
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018291
(v2.0)
Rhot2214952
403/2310.2889165/231-0.5984384/2314.2642833/2313.167812/231-2.1193137/231-1.3434
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018291
(v2.0)
Rhot2214952
144.706820769.91
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018291
(v2.0)
Rhot2214952
50.722810548.31
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017771
(v1.0)
Rhot2NM_001163766,NM_145999214952
41.022543.899210.283112.359617.7354
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017771
(v1.0)
Rhot2NM_001163766,NM_145999214952
1032.621014.09268.738350.647261.481
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017771
(v1.0)
Rhot2NM_001163766,NM_145999214952
42.89285.5436147.895
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017771
(v1.0)
Rhot2NM_001163766,NM_145999214952
41.867643.458470.1624
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017771
(v1.0)
Rhot2NM_001163766,NM_145999214952
183.177385.116
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017771
(v1.0)
Rhot2NM_001163766,NM_145999214952
42.91775.4676876.9517
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017771
(v1.0)
Rhot2NM_001163766,NM_145999214952
9.5205411.933711.9104
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017771
(v1.0)
Rhot2NM_001163766,NM_145999214952
372.503381.241
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017771
(v1.0)
Rhot2NM_001163766,NM_145999214952
13.01213.09192
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017771
(v1.0)
Rhot2NM_001163766,NM_145999214952
3.0711.08837
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017771
(v1.0)
12411H3143C10-3Mm.19077MGC31216214952
3.76353.65573.57143.63263.93793.76423.8956
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017771
(v1.0)
1426822_atMm.485882Rhot2NM_145999.2214952
000051
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017771
(v1.0)
A_51_P296100Rhot2NM_145999214952
11P1.3310.214P
0017771
(v1.0)
A_52_P535346Rhot2NM_145999214952
11P2.0390.0888P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017771
(v1.0)
Rhot2214952
3717113