DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017842
GeneRit1
SynonymsRit
Desc.Ras-like without CAAX 1
LocusNR_028056 chr3:88520776-88534970(+)
NM_009069 chr3:88520776-88534970(+)
NM_001163310 chr3:88520776-88534970(+)
DB links


Entrez 19769
MGI 108053
Ensembl ENSMUSG00000028057
Vega OTTMUSG00000035185
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018362
(v2.0)
Rit1NM_001163310,NM_009069,NR_02805619769
20.886916.581317.475417.785911.06676.753659.1719720.612510.57866.43234
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017842
(v1.0)
Rit119769
Major ZGA0.96073
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018362
(v2.0)
Rit119769
597/448-0.0984417/448-0.219164/4480.7775153/448-0.217411/448-3.17889/448-2.9098
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018362
(v2.0)
Rit119769
238/1650.0156160/165-0.159657/1651.9903131/1650.98757/165-2.344539/165-2.634
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018362
(v2.0)
Rit119769
65.207910661.52
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018362
(v2.0)
Rit119769
15.90085330
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017842
(v1.0)
Rit1NM_001163310,NM_00906919769
17.195812.060413.21377.653136.43357
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017842
(v1.0)
Rit1NM_001163310,NM_009069,NR_02805619769
196.728114.4894.476893.869893.5584
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017842
(v1.0)
Rit1NM_001163310,NM_00906919769
17.97987.6385413.1581
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017842
(v1.0)
Rit1NM_001163310,NM_00906919769
17.550111.939315.1884
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017842
(v1.0)
Rit1NM_001163310,NM_009069,NR_02805619769
133.296195.947
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017842
(v1.0)
Rit1NM_001163310,NM_00906919769
17.99037.5339216.6582
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017842
(v1.0)
Rit1NM_001163310,NM_00906919769
12.23387.389417.32156
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017842
(v1.0)
Rit1NM_001163310,NM_009069,NR_02805619769
78.049435.9321
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017842
(v1.0)
Rit1NM_001163310,NM_00906919769
18.98514.41235
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017842
(v1.0)
Rit1NM_001163310,NM_00906919769
0.2906190.866574
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017842
(v1.0)
21980L0930D04-3Mm.4009Rit119769
U003446NAP008430-001Rit;TC810025,TC810024,TC810023P704262.63212.9182.88782.96342.55432.60682.6274
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017842
(v1.0)
1420540_a_atMm.4009Rit1NM_009069.4,NM_001163310.119769
161.6750229.025084.8
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017842
(v1.0)
A_51_P236175Rit1NM_00906919769
11P0.7580.245P
Proteome N/A