DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017853
GeneRmnd5a
SynonymsGid2
Desc.required for meiotic nuclear division 5 homolog A (S. cerevisiae)
LocusNM_024288 chr6:71338628-71390631(-)
DB links


Entrez 68477
MGI 1915727
Ensembl ENSMUSG00000002222
Vega OTTMUSG00000023427
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018377
(v2.0)
Rmnd5aNM_02428868477
12.930742.389788.1478129.88187.505717.99411.742872.746579.125915.1402
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017853
(v1.0)
Rmnd5a68477
2-Cell Transient0.95895
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018377
(v2.0)
Rmnd5a68477
715/4190.2576503/4190.1471221/4192.6435540/4191.691382/419-0.2922573/419-0.1474
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018377
(v2.0)
Rmnd5a68477
398/1381.01240/1380.6782212/1384.1057506/1383.18255/138-2.508786/138-1.2668
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018377
(v2.0)
Rmnd5a68477
62.832314842.45
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018377
(v2.0)
Rmnd5a68477
10.53139311.32
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017853
(v1.0)
Rmnd5aNM_02428868477
44.045860.786196.659760.59558.20859
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017853
(v1.0)
Rmnd5aNM_02428868477
54.514469.3802124.44287.830911.381
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017853
(v1.0)
Rmnd5aNM_02428868477
46.0544.7288866.319
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017853
(v1.0)
Rmnd5aNM_02428868477
44.953260.175853.8276
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017853
(v1.0)
Rmnd5aNM_02428868477
89.481668.8536
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017853
(v1.0)
Rmnd5aNM_02428868477
46.08074.6641159.0363
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017853
(v1.0)
Rmnd5aNM_02428868477
89.491858.507454.6762
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017853
(v1.0)
Rmnd5aNM_02428868477
90.525475.7607
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017853
(v1.0)
Rmnd5aNM_02428868477
30.719242.682
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017853
(v1.0)
Rmnd5aNM_02428868477
32.116628.5128
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017853
(v1.0)
1426884_atMm.28474Rmnd5aNM_024288.268477
279.625427.8508.725494.6487.8
0017853
(v1.0)
1431068_atMm.28474Rmnd5aNM_024288.268477
895.051723.8251493.35740.05506.8
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017853
(v1.0)
A_52_P6124181110007A06RikNM_02428868477
11P1.0040.975P
0017853
(v1.0)
A_52_P786591110007A06RikNM_02428868477
11P1.3240.217P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017853
(v1.0)
Rmnd5a68477
010010