DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017878
GeneRnf10
Synonyms
Desc.ring finger protein 10
LocusNM_016698 chr5:115691779-115722904(-)
DB links


Entrez 50849
MGI 1859162
Ensembl ENSMUSG00000041740
Vega OTTMUSG00000014638
Featureprotein-coding
GO(BP)
  •   6 Terms
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      negative regulation of Schwann cell proliferation (GO:0010626)
      positive regulation of myelination (GO:0031643)
      positive regulation of transcription, DNA-dependent (GO:0045893)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018404
(v2.0)
Rnf10NM_01669850849
65.408873.6979140.39165.7599.032568.517933.0778135.93682.584764.7077
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017878
(v1.0)
Rnf1050849
Major ZGA0.99283
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018404
(v2.0)
Rnf1050849
676/4100.2081426/410-0.0608177/4102.3552463/4101.50119/410-2.3143232/410-1.415
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018404
(v2.0)
Rnf1050849
342/1540.6349212/1540.343166/1543.6086392/1542.65957/154-2.247556/154-2.0296
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018404
(v2.0)
Rnf1050849
41.13213330.93
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018404
(v2.0)
Rnf1050849
13.20737717.15
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017878
(v1.0)
Rnf10NM_01669850849
76.655797.3884123.36768.54723.0062
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017878
(v1.0)
Rnf10NM_01669850849
445.195463.154723.904416.604126.021
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017878
(v1.0)
Rnf10NM_01669850849
80.150623.9207106.253
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017878
(v1.0)
Rnf10NM_01669850849
78.234996.4105100.636
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017878
(v1.0)
Rnf10NM_01669850849
864.186837.098
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017878
(v1.0)
Rnf10NM_01669850849
80.197123.5931110.374
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017878
(v1.0)
Rnf10NM_01669850849
114.21966.184957.2612
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017878
(v1.0)
Rnf10NM_01669850849
398.249333.042
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017878
(v1.0)
Rnf10NM_01669850849
21.452736.02
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017878
(v1.0)
Rnf10NM_01669850849
79.094274.5282
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017878
(v1.0)
18026L0045B09-3Mm.30051Rnf1050849
U026625NAP097992-001Rnf10;TC824654,TC824646Q91YZ9U,F,23.16693.17473.04013.09883.07513.10183.1477
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017878
(v1.0)
1423102_a_atMm.30051Rnf10NM_016698.250849
0127.5750080.925
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017878
(v1.0)
A_51_P202652Rnf10NM_01669850849
11P1.0450.738P
Proteome N/A