DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017881
GeneRnf111
SynonymsArkadia
Descriptionring finger 111
LocusNM_033604 UCSC: chr9:70273236-70351532(-) OLP: chr9:70273236-70351532(-)
DB links


Entrez 93836
MGI 1934919
Ensembl ENSMUSG00000032217
Featureprotein-coding
GO_BP
  •   7 Terms
      protein polyubiquitination (GO:0000209)
      multicellular organismal development (GO:0007275)
      pattern specification process (GO:0007389)
      positive regulation of transforming growth factor beta receptor signaling pathway (GO:0030511)
      ubiquitin-dependent SMAD protein catabolic process (GO:0030579)
      positive regulation of protein ubiquitination (GO:0031398)
      positive regulation of transcription, DNA-dependent (GO:0045893)
GO_MF
GO_CC
KEGG
Ver2_FPKM see DBTMEE:2018407 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017881
(v1.0)
Rnf111NM_03360493836
40.272660.979160.483631.81196.42488
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017881
(v1.0)
Rnf111NM_03360493836
42.10872.8151666.5295
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017881
(v1.0)
Rnf111NM_03360493836
41.102260.366868.561
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017881
(v1.0)
Rnf111NM_03360493836
42.13322.776675.1953
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017881
(v1.0)
Rnf111NM_03360493836
55.998430.715726.2208
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017881
(v1.0)
Rnf111NM_03360493836
25.001742.3157
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017881
(v1.0)
Rnf111NM_03360493836
13.049627.7529
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017881
(v1.0)
11839H3123H04-3Mm.29783Ark-pending93836
U031056NAP094280-001TC826511Q99ML9U,F,24.01964.05773.15263.23793.03323.27123.3133
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017881
(v1.0)
1423304_a_atMm.29783Rnf111NM_033604.293836
393618.425518.575400286.025
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0017881
(v1.0)
A_52_P207151Rnf111NM_03360493836
11P0.8590.371P
Proteome N/A