DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017884
GeneRnf113a2
Synonyms
Desc.ring finger protein 113A2
LocusNM_025525 chr12:85758150-85759528(+)
DB links


Entrez 66381
MGI 1913631
Featureprotein-coding
GO(BP)
GO(MF)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018410
(v2.0)
Rnf113a2NM_02552566381
15.091228.101340.487421.625724.694126.63715.8191328.734527.615931.187
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017884
(v1.0)
Rnf113a266381
1-Cell Transient0.98104
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018410
(v2.0)
Rnf113a266381
653/3420.4192487/3420.3927358/3423.62081042/3422.929435/342-1.2076254/342-1.0242
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018410
(v2.0)
Rnf113a266381
310/1710.3437225/1710.2782344/1714.5148951/1713.787217/171-1.2248101/171-1.3459
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018410
(v2.0)
Rnf113a266381
42.92812135.48
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018410
(v2.0)
Rnf113a266381
19.31299620.12
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017884
(v1.0)
Rnf113a2NM_02552566381
29.206828.042616.119817.13414.12781
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017884
(v1.0)
Rnf113a2NM_02552566381
34.925530.276917.979219.61664.74591
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017884
(v1.0)
Rnf113a2NM_02552566381
30.53845.5189930.5951
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017884
(v1.0)
Rnf113a2NM_02552566381
29.808527.76121.3031
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017884
(v1.0)
Rnf113a2NM_02552566381
30.744623.8821
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017884
(v1.0)
Rnf113a2NM_02552566381
30.55625.443423.3645
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017884
(v1.0)
Rnf113a2NM_02552566381
14.924416.543719.0678
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017884
(v1.0)
Rnf113a2NM_02552566381
19.404522.3181
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017884
(v1.0)
Rnf113a2NM_02552566381
44.598867.2644
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017884
(v1.0)
Rnf113a2NM_02552566381
41.822928.4207
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017884
(v1.0)
7965H3057C02-3Mm.248462310020H19Rik66381
U014193NAP008009-0012310020H19Rik;TC899579Q9D7A3U,F3.75083.71473.453.63642.95183.17223.0128
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017884
(v1.0)
1428415_atMm.24846Rnf113a2NM_025525.266381
345.85367.9340.3324.150
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017884
(v1.0)
A_51_P145772Rnf113aNM_02552566381
11P1.0220.861P
Proteome N/A