DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017888
GeneRnf122
Synonyms
Desc.ring finger protein 122
LocusNM_175136 chr8:32222318-32241945(+)
DB links


Entrez 68867
MGI 1916117
Ensembl ENSMUSG00000039328
Vega OTTMUSG00000027149
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018414
(v2.0)
Rnf122NM_17513668867
0.65609464.492447.770240.171326.78542.459871.9746457.729622.55882.91213
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017888
(v1.0)
Rnf12268867
Maternal RNA0.99409
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018414
(v2.0)
Rnf12268867
733/4860.0799433/486-0.2821147/4861.8501448/4861.2096254/4861.1151230/4860.7391
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018414
(v2.0)
Rnf12268867
380/2070.362200/207-0.165127/2072.8254391/2072.2351194/2071.9429866/2071.461
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018414
(v2.0)
Rnf12268867
64.763415741.25
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018414
(v2.0)
Rnf12268867
13.470110113.34
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017888
(v1.0)
Rnf122NM_17513668867
67.050333.076829.890918.54511.38747
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017888
(v1.0)
Rnf122FR128887,FR275215,NM_17513668867
361.317187.652282.274263.6149.22711
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017888
(v1.0)
Rnf122NM_17513668867
70.10730.2399436.0875
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017888
(v1.0)
Rnf122NM_17513668867
68.431632.744642.8492
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017888
(v1.0)
Rnf122FR128887,FR275215,NM_17513668867
910.7351681.92
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017888
(v1.0)
Rnf122NM_17513668867
70.1480.23665446.9955
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017888
(v1.0)
Rnf122NM_17513668867
27.674417.906115.6307
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017888
(v1.0)
Rnf122FR128887,FR275215,NM_17513668867
886.3971120.75
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017888
(v1.0)
Rnf122NM_17513668867
23.64554.70102
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017888
(v1.0)
Rnf122NM_17513668867
0.5321760.694547
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017888
(v1.0)
18306L0079B11-3Mm.295321110063C11Rik68867
U009227NAP095163-001TC881871U,F,23.37653.35433.6423.48313.41623.49983.3728
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017888
(v1.0)
1454857_atMm.29532Rnf122NM_175136.268867
541.9315.1827.07500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017888
(v1.0)
A_52_P566396Rnf122NM_17513668867
11P1.2910.293P
0017888
(v1.0)
A_52_P636742Rnf122NM_17513668867
11P0.4980.093P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017888
(v1.0)
Rnf12268867
020020