DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017890
GeneRnf125
Synonyms
Desc.ring finger protein 125
LocusNM_026301 chr18:21103126-21142349(+)
DB links


Entrez 67664
MGI 1914914
Ensembl ENSMUSG00000033107
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      RIG-I-like receptor signaling pathway (mmu04622)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018416
(v2.0)
Rnf125NM_02630167664
9.6969211.90618.73849152.788157.7053.297460.372447.61169106.8972.16594
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017890
(v1.0)
Rnf12567664
Major ZGA0.99783
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018416
(v2.0)
Rnf12567664
434/315-0.0503315/315-0.115817/315-0.582765/315-0.935144/3150.9195871/3150.8659
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018416
(v2.0)
Rnf12567664
221/169-0.125145/169-0.33499/169-0.577928/169-1.232985/1691.0481502/1690.9671
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018416
(v2.0)
Rnf12567664
78.852511071.68
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018416
(v2.0)
Rnf12567664
32.28426152.92
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017890
(v1.0)
Rnf125NM_02630167664
12.37466.03597113.674108.8470.269253
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017890
(v1.0)
Rnf125NM_02630167664
3.836782.0948335.691732.10130.121044
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017890
(v1.0)
Rnf125NM_02630167664
12.93883.546266.58537
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017890
(v1.0)
Rnf125NM_02630167664
12.62965.975365.62739
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017890
(v1.0)
Rnf125NM_02630167664
2.12782.19685
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017890
(v1.0)
Rnf125NM_02630167664
12.94633.497696.17193
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017890
(v1.0)
Rnf125NM_02630167664
105.245105.09673.7372
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017890
(v1.0)
Rnf125NM_02630167664
31.756320.2957
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017890
(v1.0)
Rnf125NM_02630167664
5.72642106.821
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017890
(v1.0)
Rnf125NM_02630167664
1.757950.668355
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017890
(v1.0)
1429399_atMm.45980Rnf125NM_026301.267664
705.85305.7753178.252414.5752582.3
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017890
(v1.0)
A_51_P386539Rnf125NM_02630167664
11P0.3430.101P
Proteome N/A