DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017914
GeneRnf168
Synonyms
Desc.ring finger protein 168
LocusNM_027355 chr16:32277547-32301525(+)
DB links


Entrez 70238
MGI 1917488
Ensembl ENSMUSG00000014074
Vega OTTMUSG00000025774
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018441
(v2.0)
Rnf168NM_02735570238
3.8141359.437673.776832.955634.647112.88248.6969471.953330.590311.1218
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017914
(v1.0)
Rnf16870238
Maternal RNA0.94771
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018441
(v2.0)
Rnf16870238
779/3500.64641/3500.75511155/3505.27563974/3504.826539/350-1.0886344/350-0.6221
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018441
(v2.0)
Rnf16870238
388/1510.8445305/1510.8937773/1515.84732228/1515.19124/151-2.897977/151-1.5524
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018441
(v2.0)
Rnf16870238
43.862713033.74
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018441
(v2.0)
Rnf16870238
12.76787217.73
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017914
(v1.0)
Rnf168NM_02735570238
61.765650.951424.545824.03356.12274
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017914
(v1.0)
Rnf168NM_02735570238
75.303456.740428.122527.96547.10716
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017914
(v1.0)
Rnf168NM_02735570238
64.58171.3948755.589
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017914
(v1.0)
Rnf168NM_02735570238
63.038150.439853.2934
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017914
(v1.0)
Rnf168NM_02735570238
57.623460.6074
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017914
(v1.0)
Rnf168NM_02735570238
64.61921.3757658.4505
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017914
(v1.0)
Rnf168NM_02735570238
22.725623.205321.1762
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017914
(v1.0)
Rnf168NM_02735570238
27.663225.2951
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017914
(v1.0)
Rnf168NM_02735570238
96.243918.281
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017914
(v1.0)
Rnf168NM_02735570238
11.790115.9308
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017914
(v1.0)
1455585_atMm.228263Rnf168NM_027355.270238
1322.975998.9747.751052.425932.325
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017914
(v1.0)
A_51_P270577Rnf168NM_02735570238
11P0.5340.146P
0017914
(v1.0)
A_52_P425706Rnf168NM_02735570238
11P1.070.621P
Proteome N/A