DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017925
GeneRnf19a
SynonymsDorfin
Rnf19
XY body protein
XYbp
Desc.ring finger protein 19A
LocusNM_013923 chr15:36169689-36212902(-)
DB links


Entrez 30945
MGI 1353623
Ensembl ENSMUSG00000022280
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018452
(v2.0)
Rnf19aNM_013923,NR_10617330945
605.59811.764320.360413.58735.8121310.809411.426616.44717.1461711.1585
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017925
(v1.0)
Rnf19a30945
Minor ZGA0.98908
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018452
(v2.0)
Rnf19a30945
686/3790.3424515/3790.3254418/3793.70041310/3793.1121131/3790.5204715/3790.3156
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018452
(v2.0)
Rnf19a30945
392/1500.8687242/1500.5707396/1504.8931182/1504.286750/1500.4619306/1500.4268
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018452
(v2.0)
Rnf19a30945
47.502611342.04
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018452
(v2.0)
Rnf19a30945
12.90857616.98
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017925
(v1.0)
Rnf19aNM_01392330945
12.226814.116710.12194.024277.96944
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017925
(v1.0)
Rnf19aNM_01392330945
13.605414.255610.50864.16858.33694
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017925
(v1.0)
Rnf19aNM_01392330945
12.784220.917815.4016
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017925
(v1.0)
Rnf19aNM_01392330945
12.478713.974912.1688
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017925
(v1.0)
Rnf19aNM_01392330945
14.475512.4846
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017925
(v1.0)
Rnf19aNM_01392330945
12.791720.631313.3464
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017925
(v1.0)
Rnf19aNM_01392330945
9.371333.885594.93728
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017925
(v1.0)
Rnf19aNM_01392330945
4.123525.3516
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017925
(v1.0)
Rnf19aNM_01392330945
12.564912.4929
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017925
(v1.0)
Rnf19aNM_01392330945
12.08019.94628
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017925
(v1.0)
12834H3153A08-3Mm.5181Rnf1930945
U036092NAP084827-1Rnf19;TC800040,TC800039P50636U3.34323.34253.04372.84472.28592.51752.4532
0017925
(v1.0)
14734J0805C11-3Mm.17539Rnf1930945
NAP049278-1Rnf19TC8443893.27433.10243.07923.08053.77083.38083.6312
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017925
(v1.0)
1417508_atMm.5181Rnf19aNM_013923.230945
222.8380.625351.9104.525125.775
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017925
(v1.0)
A_51_P277444Rnf19NM_01392330945
11P1.3960.185P
Proteome N/A