DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017931
GeneRnf214
Synonyms
Desc.ring finger protein 214
LocusNM_178709 chr9:45671774-45714960(-)
DB links


Entrez 235315
MGI 2444451
Ensembl ENSMUSG00000042790
Vega OTTMUSG00000034964
Featureprotein-coding
GO(BP)
GO(MF)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018458
(v2.0)
Rnf214NM_178709235315
5.7402321.492740.346121.059811.81752.646496.0165437.520912.00272.3812
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017931
(v1.0)
Rnf214235315
Minor ZGA0.98574
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018458
(v2.0)
Rnf214235315
783/5000.134482/500-0.1687543/5003.68821449/5002.860112/500-3.219598/500-2.9312
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018458
(v2.0)
Rnf214235315
391/2390.1966240/239-0.1097512/2394.63161320/2393.78271/239-4.86847/239-2.9059
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018458
(v2.0)
Rnf214235315
62.062413346.66
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018458
(v2.0)
Rnf214235315
17.60058720.23
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017931
(v1.0)
Rnf214NM_178709235315
22.345927.891415.6748.176884.20025
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017931
(v1.0)
Rnf214NM_178709235315
270.433265.594624.61129.9531.6308
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017931
(v1.0)
Rnf214NM_178709235315
23.36472.0992130.4302
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017931
(v1.0)
Rnf214NM_178709235315
22.806227.611427.7978
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017931
(v1.0)
Rnf214NM_178709235315
587.05434.465
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017931
(v1.0)
Rnf214NM_178709235315
23.37822.0704630.4877
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017931
(v1.0)
Rnf214NM_178709235315
14.51167.895118.31476
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017931
(v1.0)
Rnf214NM_178709235315
213.385188.597
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017931
(v1.0)
Rnf214NM_178709235315
17.627913.7393
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017931
(v1.0)
Rnf214NM_178709235315
6.81516.98753
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017931
(v1.0)
1427273_atMm.220945Rnf214NM_178709.4235315
151167.85148.32500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017931
(v1.0)
A_51_P460067D130054N24RikNM_178709235315
11P1.0780.636P
0017931
(v1.0)
A_52_P147903D130054N24RikNM_178709235315
11P0.5660.135P
0017931
(v1.0)
A_52_P51479D130054N24RikNM_178709235315
11P0.7920.261P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017931
(v1.0)
Rnf214235315
100200