DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017936
GeneRnf220
Synonyms
Desc.ring finger protein 220
LocusNM_025739 chr4:116944069-117169520(-)
DB links


Entrez 66743
MGI 1913993
Ensembl ENSMUSG00000028677
Vega OTTMUSG00000008570
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018463
(v2.0)
Rnf220NM_02573966743
27.7133107.289165.18132.67215.538445.497110.3295196.89920.638443.9716
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017936
(v1.0)
Rnf22066743
Minor ZGA0.98068
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018463
(v2.0)
Rnf22066743
934/4730.4679631/4730.299143/4731.8488690/4731.8705733/4732.67913244/4732.1761
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018463
(v2.0)
Rnf22066743
429/1580.9239274/1580.674669/1582.3198304/1582.2574290/1582.90141361/1582.4998
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018463
(v2.0)
Rnf22066743
57.128922225.73
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018463
(v2.0)
Rnf22066743
11.383910311.05
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017936
(v1.0)
Rnf220NM_02573966743
111.558114.69224.31510.75337.35351
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017936
(v1.0)
Rnf220FR166500,FR372659,NM_02573966743
1324.861468.86307.981135.9160.137
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017936
(v1.0)
Rnf220NM_02573966743
116.64410.135125.132
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017936
(v1.0)
Rnf220NM_02573966743
113.856113.54146.057
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017936
(v1.0)
Rnf220FR166500,FR372659,NM_02573966743
2256.972638.14
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017936
(v1.0)
Rnf220NM_02573966743
116.7129.99622160.19
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017936
(v1.0)
Rnf220NM_02573966743
22.511910.382714.3948
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017936
(v1.0)
Rnf220FR166500,FR372659,NM_02573966743
278.862187.53
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017936
(v1.0)
Rnf220NM_02573966743
72.113142.0349
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017936
(v1.0)
Rnf220NM_02573966743
84.076876.6156
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017936
(v1.0)
5677H3005B01-3Mm.282864931406I20Rik66743
U025431NAP096714-0014931406I20Rik;TC935341,TC935333,TC935332Q9D4L6U,F,24.39914.42033.82433.91563.71233.76053.9389
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017936
(v1.0)
1415717_atMm.318331Rnf220NM_025739.266743
387.475494.2334.650150.45
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017936
(v1.0)
A_51_P1522224931406I20RikNM_02573966743
11P0.8360.382P
0017936
(v1.0)
A_52_P4187344931406I20RikNM_02573966743
11P1.0290.823P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017936
(v1.0)
Rnf22066743
110110