DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017947
GeneRnf4
SynonymsGtrgeo8
Descriptionring finger protein 4
LocusNM_011278 UCSC: chr5:34679039-34696079(+) OLP: chr5:34679039-34696079(+)
DB links


Entrez 19822
MGI 1201691
Ensembl ENSMUSG00000029110
Featureprotein-coding
GO_BP
  •   14 Terms
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      protein ubiquitination (GO:0016567)
      proteasomal ubiquitin-dependent protein catabolic process (GO:0043161)
      positive regulation of transcription, DNA-dependent (GO:0045893)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      response to arsenic-containing substance (GO:0046685)
      protein autoubiquitination (GO:0051865)
      protein K63-linked ubiquitination (GO:0070534)
      protein K48-linked ubiquitination (GO:0070936)
      protein K11-linked ubiquitination (GO:0070979)
      protein K6-linked ubiquitination (GO:0085020)
      regulation of spindle assembly (GO:0090169)
      regulation of kinetochore assembly (GO:0090234)
GO_MF
GO_CC
KEGG
Ver2_FPKM see DBTMEE:2018475 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017947
(v1.0)		Rnf4NM_01127819822
149.066179.333222.79156.42453.8252
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017947
(v1.0)		Rnf4NM_01127819822
155.86212.597195.656
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017947
(v1.0)		Rnf4NM_01127819822
152.137177.532191.921
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017947
(v1.0)		Rnf4NM_01127819822
155.95212.4245210.492
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017947
(v1.0)		Rnf4NM_01127819822
206.268151.034144.674
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017947
(v1.0)		Rnf4NM_01127819822
83.259144.22
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017947
(v1.0)		Rnf4NM_01127819822
71.087444.8806
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017947
(v1.0)		18388L0205B06-3Mm.21281Rnf419822
U005486NAP092906-001Rnf4;TC841626,TC798914,TC798913Q9QZS2U,F,24.2484.42334.11574.36673.86554.03354.061
0017947
(v1.0)		21228L0840H08-3Mm.21281Rnf419822
U005486NAP031406-1Rnf4;TC798915Q9QZS2U,F,22.95133.09153.53723.52572.90453.17583.0136
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017947
(v1.0)		1423654_a_atMm.21281Rnf4NM_011278.419822
626.825634.05902.825538.4385.55
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0017947
(v1.0)		A_51_P215540Rnf4NM_01127819822
11P1.0220.864P
0017947
(v1.0)		A_52_P189567Rnf4NM_01127819822
11P0.5870.144P
Proteome N/A