DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017949
GeneRnf41
SynonymsD10Ertd722e
FLRF
Nrdp1
Desc.ring finger protein 41
LocusNM_026259 chr10:127848672-127878497(+)
NM_001164237 chr10:127848672-127878497(+)
DB links


Entrez 67588
MGI 1914838
Ensembl ENSMUSG00000025373
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018477
(v2.0)
Rnf41NM_001164237,NM_026259,NR_104288,NR_104289,NR_10429067588
11.88838.490479.5206829.353833.00027.4681310.274513.003431.39228.88657
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017949
(v1.0)
Rnf4167588
Major ZGA0.98579
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018477
(v2.0)
Rnf4167588
933/4850.4303612/4850.21891477/4855.1733844/4854.310714/485-2.9695147/485-2.3097
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018477
(v2.0)
Rnf4167588
475/2150.6284296/2150.3436915/2155.61292166/2154.64787/215-2.718168/215-2.235
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018477
(v2.0)
Rnf4167588
47.329716828.17
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018477
(v2.0)
Rnf4167588
11.41099112.54
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017949
(v1.0)
Rnf41NM_001164237,NM_02625967588
8.809626.4560421.819122.84697.32047
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017949
(v1.0)
Rnf41NM_001164237,NM_02625967588
203.154114.408457.278433.62381.3119
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017949
(v1.0)
Rnf41NM_001164237,NM_02625967588
9.211264.346517.04368
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017949
(v1.0)
Rnf41NM_001164237,NM_02625967588
8.991116.391229.63766
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017949
(v1.0)
Rnf41NM_001164237,NM_02625967588
14.274121.2579
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017949
(v1.0)
Rnf41NM_001164237,NM_02625967588
9.216624.2869810.5703
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017949
(v1.0)
Rnf41NM_001164237,NM_02625967588
20.201122.059621.6055
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017949
(v1.0)
Rnf41NM_001164237,NM_02625967588
434.452319.54
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017949
(v1.0)
Rnf41NM_001164237,NM_02625967588
6.570278.98953
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017949
(v1.0)
Rnf41NM_001164237,NM_02625967588
0.3353330.116468
NIA60mer N/A
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017949
(v1.0)
A_51_P174864Rnf41AK04410367588
11P0.5630.119P
0017949
(v1.0)
A_52_P123738Rnf41AK04410367588
11P4.1080.0467P
0017949
(v1.0)
A_52_P48398Rnf41NM_02625967588
11P1.2760.262P
Proteome N/A