DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017954
GeneRnf7
SynonymsRbx2
Sag
Desc.ring finger protein 7
LocusNM_011279 chr9:96371376-96379014(-)
DB links


Entrez 19823
MGI 1337096
Ensembl ENSMUSG00000051234
Vega OTTMUSG00000022972
Featureprotein-coding
GO(BP)
  •   5 Terms
      activation of cysteine-type endopeptidase activity involved in apoptotic process (GO:0006919)
      intrinsic apoptotic signaling pathway in response to oxidative stress (GO:0008631)
      apoptotic mitochondrial changes (GO:0008637)
      negative regulation of apoptotic process (GO:0043066)
      protein neddylation (GO:0045116)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Ubiquitin mediated proteolysis (mmu04120)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018482
(v2.0)
Rnf7NM_01127919823
58.16376.954734.66447143.822397.648159.09733.88195.93895408.472155.155
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017954
(v1.0)
Rnf719823
MGA0.99996
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018482
(v2.0)
Rnf719823
688/4080.2405433/408-0.0303399/4083.53021468/4083.170679/408-0.3074829/4080.4226
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018482
(v2.0)
Rnf719823
301/1620.3789165/162-0.0892207/1623.8574691/1623.403819/162-0.9967186/162-0.3972
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018482
(v2.0)
Rnf719823
95.242116458.07
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018482
(v2.0)
Rnf719823
26.85549229.19
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017954
(v1.0)
Rnf7NM_01127919823
7.229583.22928107.162276.60424.1681
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017954
(v1.0)
Rnf7NM_01127919823
1.128570.83836723.565561.55257.41884
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017954
(v1.0)
Rnf7NM_01127919823
7.5591921.27113.52322
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017954
(v1.0)
Rnf7NM_01127919823
7.378523.196864.38733
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017954
(v1.0)
Rnf7NM_01127919823
0.8510290.976878
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017954
(v1.0)
Rnf7NM_01127919823
7.5635820.97974.81188
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017954
(v1.0)
Rnf7NM_01127919823
99.2149267.072282.473
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017954
(v1.0)
Rnf7NM_01127919823
60.884655.7491
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017954
(v1.0)
Rnf7NM_01127919823
1.8906170.127
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017954
(v1.0)
Rnf7NM_01127919823
2.928331.62717
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017954
(v1.0)
19240L0259F11-3Mm.28235Rnf719823
U031211NAP094934-001Rnf7;TC935101,TC935098,TC935094Q9WTZ1U,F,23.75693.623.87594.46854.50444.48384.4014
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017954
(v1.0)
1426414_a_atMm.28235Rnf7NM_011279.219823
150.20672.8251305.275616.025
0017954
(v1.0)
1456600_a_atMm.28235Rnf7NM_011279.219823
120.65113.35778.1753579.0251626.675
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017954
(v1.0)
A_51_P414166Rnf7BC01112719823
11P0.4220.0802P
Proteome N/A