DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017955
GeneRnf8
SynonymsAIP37
Desc.ring finger protein 8
LocusNM_021419 chr17:29751776-29778604(+)
DB links


Entrez 58230
MGI 1929069
Ensembl ENSMUSG00000090083
Vega OTTMUSG00000034432
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018483
(v2.0)
Rnf8NM_02141958230
8.12784194.57192.901255.083971.420316.387515.970398.385367.192319.0822
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017955
(v1.0)
Rnf858230
Maternal RNA0.99295
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018483
(v2.0)
Rnf858230
771/5250.0415496/525-0.1978160/5251.8628418/5250.99948/525-1.3751456/525-0.8006
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018483
(v2.0)
Rnf858230
359/1700.5629239/1700.3733143/1703.2621341/1702.318512/170-1.686164/170-1.9834
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018483
(v2.0)
Rnf858230
80.465416050.29
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018483
(v2.0)
Rnf858230
16.23819317.46
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017955
(v1.0)
Rnf8NM_02141958230
202.19964.582341.007449.560511.2851
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017955
(v1.0)
Rnf8NM_02141958230
4192.93709.663924.168569.241231.79
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017955
(v1.0)
Rnf8NM_02141958230
211.4182.9724370.4607
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017955
(v1.0)
Rnf8NM_02141958230
206.36563.933873.0375
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017955
(v1.0)
Rnf8NM_02141958230
112.106123.411
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017955
(v1.0)
Rnf8NM_02141958230
211.5412.9317280.1051
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017955
(v1.0)
Rnf8NM_02141958230
37.966547.852646.5821
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017955
(v1.0)
Rnf8NM_02141958230
59.25256.65
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017955
(v1.0)
Rnf8NM_02141958230
51.56712.5074
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017955
(v1.0)
Rnf8NM_02141958230
60.34929.1591
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017955
(v1.0)
7349H3046F10-3Rnf858230
U017771NAP097459-001Rnf8;TC854095U,F,23.51933.52163.57043.58533.31853.37823.2773
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017955
(v1.0)
A_51_P162426Rnf8NM_02141958230
11P0.6960.25P
Proteome N/A