DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017966
GeneRnps1
Synonyms
Desc.ribonucleic acid binding protein S1
LocusNM_009070 chr17:24551620-24562842(+)
NM_001080128 chr17:24551620-24562842(+)
NM_001080127 chr17:24551620-24562842(+)
DB links


Entrez 19826
MGI 97960
Ensembl ENSMUSG00000034681
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018494
(v2.0)
Rnps1NM_001080127,NM_001080128,NM_00907019826
28.857458.5782145.126119.54182.26105.13964.3697173.054143.329119.166
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017966
(v1.0)
Rnps119826
MGA0.97651
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018494
(v2.0)
Rnps119826
653/460-0.0074405/460-0.2992266/4602.7787599/4601.70678/460-3.630881/460-3.0814
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018494
(v2.0)
Rnps119826
351/1950.3337185/195-0.1911257/1953.9179578/1952.88296/195-2.772747/195-2.6137
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018494
(v2.0)
Rnps119826
61.022615639.12
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018494
(v2.0)
Rnps119826
21.905711219.56
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017966
(v1.0)
Rnps1NM_001080127,NM_001080128,NM_00907019826
60.203599.565188.9832126.11445.8016
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017966
(v1.0)
Rnps1FR228804,NM_001080127,NM_001080128,NM_00907019826
13.258119.547424.012947.492317.9617
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017966
(v1.0)
Rnps1NM_001080127,NM_001080128,NM_00907019826
62.948310.5534108.628
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017966
(v1.0)
Rnps1NM_001080127,NM_001080128,NM_00907019826
61.443798.5653128.221
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017966
(v1.0)
Rnps1FR228804,NM_001080127,NM_001080128,NM_00907019826
411.456324.196
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017966
(v1.0)
Rnps1NM_001080127,NM_001080128,NM_00907019826
62.984810.4089140.629
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017966
(v1.0)
Rnps1NM_001080127,NM_001080128,NM_00907019826
82.3846121.76899.1835
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017966
(v1.0)
Rnps1FR228804,NM_001080127,NM_001080128,NM_00907019826
46.979735.4425
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017966
(v1.0)
Rnps1NM_001080127,NM_001080128,NM_00907019826
19.746249.073
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017966
(v1.0)
Rnps1NM_001080127,NM_001080128,NM_00907019826
108.18392.3128
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017966
(v1.0)
11676H3121D06-3Mm.1951Rnps119826
U017634NAP098108-001Rnps1;TC852602,TC852598Q62150U,F,24.45344.35913.73344.35924.10924.14843.947
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017966
(v1.0)
1448324_atMm.1951Rnps1NM_009070.2,NM_001080127.1,NM_001080128.119826
303.15698.275544.3626418.575
0017966
(v1.0)
1437027_x_atMm.1951Rnps1NM_009070.2,NM_001080127.1,NM_001080128.119826
694.1751801.02513801565.851009.65
0017966
(v1.0)
1437851_x_atMm.1951Rnps1NM_009070.2,NM_001080127.1,NM_001080128.119826
423.751015.975662.45921.7629.175
0017966
(v1.0)
1438267_x_atMm.1951Rnps1NM_009070.2,NM_001080127.1,NM_001080128.119826
442.11454.025930.551187.55833.9
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017966
(v1.0)
A_51_P393524Rnps1NM_00907019826
11P0.7240.191P
0017966
(v1.0)
A_52_P41985Rnps1NM_00907019826
11P0.5240.122P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017966
(v1.0)
Rnps119826
010010