DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017976
GeneRod1
Synonyms
Desc.ROD1 regulator of differentiation 1 (S. pombe)
LocusNM_144904 chr4:59484740-59562236(-)
NM_178164 chr4:59484740-59562236(-)
DB links


Entrez 230257
MGI 1923334
Ensembl ENSMUSG00000028382
Vega OTTMUSG00000007334
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM N/A
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017976
(v1.0)
Rod1230257
Minor ZGA0.95262
SPR_Histone_Erkek_+-5KfromTSS N/A
SPR_Histone_Erkek_+-2KfromTSS N/A
SPR_Methy_Kobayashi_+-5KfromTSS N/A
SPR_Methy_Kobayashi_+-2KfromTSS N/A
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017976
(v1.0)
Rod1NM_144904,NM_178164230257
18.29821.31410.07936.093748.77007
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017976
(v1.0)
Rod1FR290359,NM_144904,NM_178164230257
176.781186.86843.075624.673326.3553
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017976
(v1.0)
Rod1NM_144904,NM_178164230257
19.13227.7585123.2541
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017976
(v1.0)
Rod1NM_144904,NM_178164230257
18.67521.116.0901
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017976
(v1.0)
Rod1FR290359,NM_144904,NM_178164230257
567.524738.07
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017976
(v1.0)
Rod1NM_144904,NM_178164230257
19.14347.6522417.6471
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017976
(v1.0)
Rod1NM_144904,NM_178164230257
9.33195.883755.38148
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017976
(v1.0)
Rod1FR290359,NM_144904,NM_178164230257
12.317613.5984
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017976
(v1.0)
Rod1NM_144904,NM_178164230257
25.565924.7141
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017976
(v1.0)
Rod1NM_144904,NM_178164230257
1.337762.37121
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017976
(v1.0)
5472H3001B02-3Mm.220991MGC11742230257
U025125NAP092462-001MGC11742;TC904202,TC853530,TC853528Q923C3U,F,23.31233.31583.12593.08423.1813.22893.4616
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017976
(v1.0)
1424083_atMm.331640Rod1NM_144904.2,NM_178164.3230257
39.7586.85148.575055.175
0017976
(v1.0)
1455819_atMm.331640Rod1NM_144904.2,NM_178164.3230257
95.150109.25212.075754.775
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017976
(v1.0)
A_51_P310040Rod1NM_144904230257
11P0.7010.174P
Proteome N/A