DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017977
GeneRogdi
SynonymsLzf
Desc.rogdi homolog (Drosophila)
LocusNM_133185 chr16:5008822-5013646(-)
DB links


Entrez 66049
MGI 1913299
Ensembl ENSMUSG00000022540
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018504
(v2.0)
RogdiNM_13318566049
47.797411.705814.80057.701519.8605333.94573.4500121.60047.2165534.8146
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017977
(v1.0)
Rogdi66049
1-Cell Transient0.91275
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018504
(v2.0)
Rogdi66049
835/5330.1346488/533-0.243806/5334.1671685/5332.985919/533-2.6895156/533-2.3607
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018504
(v2.0)
Rogdi66049
438/2440.33261/244-0.019619/2444.87641251/2443.67588/244-2.727463/244-2.5244
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018504
(v2.0)
Rogdi66049
86.995913564.44
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018504
(v2.0)
Rogdi66049
24.31497034.74
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017977
(v1.0)
RogdiNM_13318566049
12.1710.26065.723326.856972.46964
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017977
(v1.0)
RogdiNM_13318566049
57.375432.731843.419340.76211.0513
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017977
(v1.0)
RogdiNM_13318566049
12.724817.4811.1945
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017977
(v1.0)
RogdiNM_13318566049
12.420710.157516.0064
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017977
(v1.0)
RogdiNM_13318566049
70.416268.3139
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017977
(v1.0)
RogdiNM_13318566049
12.732217.240617.5553
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017977
(v1.0)
RogdiNM_13318566049
5.298916.620674.99209
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017977
(v1.0)
RogdiNM_13318566049
81.928757.8399
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017977
(v1.0)
RogdiNM_13318566049
5.476982.58794
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017977
(v1.0)
RogdiNM_13318566049
4.92871.45319
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017977
(v1.0)
13214J0004F03-30610011C19Rik66049
U036757NAP004642-0010610011C19Rik;TC937304,TC909839Q922N44.0534.28964.65224.38474.06744.34064.1722
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017977
(v1.0)
1451421_a_atMm.27792RogdiNM_133185.266049
0000367.05
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017977
(v1.0)
A_52_P226788MGI:1913299NM_13318566049
11P0.7910.387P
0017977
(v1.0)
A_52_P303077MGI:1913299NM_13318566049
11P1.2670.353P
Proteome N/A