DBTMEE:0017992
| Gene | Rpa1 |
| Synonyms | 70kDa
RF-A
RP-A
Rpa |
| Description | replication protein A1 |
| Locus | NM_026653 UCSC: chr11:75113761-75161885(-) OLP: chr11:75113761-75161885(-)
NM_001164223 UCSC: chr11:75113761-75161885(-) OLP: chr11:75113761-75161885(-)
|
| DB links |
Entrez 68275
MGI 1915525
Ensembl ENSMUSG00000000751
Vega OTTMUSG00000006199
|
| Feature | protein-coding |
| GO_BP |
-
 11 Terms
|
| GO_MF |
-
5 Terms
|
| GO_CC |
-
9 Terms
|
| KEGG |
-
4 Terms
|
| Ver2_FPKM |
see DBTMEE:2018519 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0017992
(v1.0) | Rpa1 | NM_001164223,NM_026653 | 68275
| 68.7188 | 37.4777 | 4.14348 | 5.30256 | 48.0928 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0017992
(v1.0) | Rpa1 | NM_001164223,NM_026653 | 68275
| 71.8518 | 6.53637 | 40.889 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0017992
(v1.0) | Rpa1 | NM_001164223,NM_026653 | 68275
| 70.1345 | 37.1014 | 41.3623 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0017992
(v1.0) | Rpa1 | NM_001164223,NM_026653 | 68275
| 71.8936 | 6.44685 | 45.3647 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0017992
(v1.0) | Rpa1 | NM_001164223,NM_026653 | 68275
| 3.83621 | 5.11983 | 5.97275 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0017992
(v1.0) | Rpa1 | NM_001164223,NM_026653 | 68275
| 10.2609 | 4.73035 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0017992
(v1.0) | Rpa1 | NM_001164223,NM_026653 | 68275
| 36.1215 | 19.6837 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0017992
(v1.0) | 4919 | G0114G12-3 | Mm.180734 | Rpa1 | 68275
| U033076 | NAP005831-001 | Rpa1; | TC847049 | Q9D2C8 | U,F,2 | 4.0806 | 4.1093 | 3.2351 | 3.2009 | 2.9642 | 3.3118 | 3.3261 |
0017992
(v1.0) | 8113 | H3060A04-3 | Mm.180734 | Rpa1 | 68275
| U033076 | NAP056608-1 | Rpa1; | TC847051 | Q9D2C8 | U,F,2 | 3.3532 | 3.1916 | 3.1433 | 3.2033 | 3.3647 | 3.2376 | 3.2909 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0017992
(v1.0) | 1437309_a_at | Mm.180734 | Rpa1 | NM_001164223.1,NM_026653.2 | 68275
| 4393.05 | 4194.7 | 889.275 | 651.65 | 2336.62 |
0017992
(v1.0) | 1423293_at | Mm.180734 | Rpa1 | NM_001164223.1,NM_026653.2 | 68275
| 891.625 | 664.475 | 169.95 | 157.025 | 440.45 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0017992
(v1.0) | A_51_P333159 | Rpa1 | NM_026653 | 68275
| 1 | 1 | P | 0.826 | 0.306 | P |
|
| Proteome |
| DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
|---|
0017992
(v1.0) | Rpa1 | 68275
| 6 | 4 | 2 | 6 | 4 | 2 |
|
