DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017993
GeneRpa2
Synonyms30-kDa protein
Rf-A2
RPA34
Desc.replication protein A2
LocusNM_011284 chr4:132324275-132334661(+)
DB links


Entrez 19891
MGI 1339939
Ensembl ENSMUSG00000028884
Vega OTTMUSG00000009961
Featureprotein-coding
GO(BP)
  •   1 Terms
      regulation of double-strand break repair via homologous recombination (GO:0010569)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018520
(v2.0)
Rpa2NM_01128419891
7.8936458.236919.0546131.25975.415264.103121.840322.163578.49380.9045
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017993
(v1.0)
Rpa219891
2-Cell Transient0.9426
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018520
(v2.0)
Rpa219891
553/3760.0436324/376-0.3366/3761.0667226/3760.593643/376-1.0533321/376-0.8245
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018520
(v2.0)
Rpa219891
294/2040.0144159/204-0.47362/2041.8226196/2041.263211/204-2.0588120/204-1.3538
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018520
(v2.0)
Rpa219891
75.057514850.71
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018520
(v2.0)
Rpa219891
25.33949327.25
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017993
(v1.0)
Rpa2NM_01128419891
60.5313.247197.762852.262815.5676
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017993
(v1.0)
Rpa2NM_01128419891
97.956927.6441128.12281.189730.8865
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017993
(v1.0)
Rpa2NM_01128419891
63.28972.8867814.4529
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017993
(v1.0)
Rpa2NM_01128419891
61.77713.114116.4445
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017993
(v1.0)
Rpa2NM_01128419891
103.707113.061
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017993
(v1.0)
Rpa2NM_01128419891
63.32652.8472418.0358
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017993
(v1.0)
Rpa2NM_01128419891
90.513150.461854.3712
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017993
(v1.0)
Rpa2NM_01128419891
314.021280.64
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017993
(v1.0)
Rpa2NM_01128419891
12.128133.0552
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017993
(v1.0)
Rpa2NM_01128419891
1.060520.923402
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017993
(v1.0)
19258L0262A06-3Mm.2870Rpa219891
U004904NAP003737-001Rpa2;TC927887,TC892527Q62193U,F,22.87992.95772.97093.22923.08933.13662.9661
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017993
(v1.0)
1416433_atMm.2870Rpa2NM_011284.319891
511.598.1400.45503.925364.775
0017993
(v1.0)
1454011_a_atMm.2870Rpa2NM_011284.319891
138.5750113.65107.92583.425
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017993
(v1.0)
Rpa219891
221323