DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018008
GeneRpia
Synonyms
Desc.ribose 5-phosphate isomerase A
LocusNM_009075 chr6:70715714-70742169(-)
DB links


Entrez 19895
MGI 103254
Ensembl ENSMUSG00000053604
Vega OTTMUSG00000022844
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
  •   1 Terms
      intracellular membrane-bounded organelle (GO:0043231)
KEGG
  •   2 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018535
(v2.0)
RpiaNM_00907519895
9.0878635.250694.6271107.58995.65383.214538.94065111.24170.80194.05841
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018008
(v1.0)
Rpia19895
2-Cell Transient0.81524
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018535
(v2.0)
Rpia19895
662/4520.0376420/452-0.221687/4521.2021253/4520.491854/452-0.9943387/452-0.8209
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018535
(v2.0)
Rpia19895
294/210-0.0273195/210-0.22284/2102.2152236/2101.488618/210-1.4369106/210-1.5721
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018535
(v2.0)
Rpia19895
59.552712049.63
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018535
(v2.0)
Rpia19895
20.11597825.79
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018008
(v1.0)
RpiaNM_00907519895
36.631765.762980.059166.38456.39324
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018008
(v1.0)
RpiaNM_00907519895
256.172391.601463.25470.47634.4746
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018008
(v1.0)
RpiaNM_00907519895
38.30183.3235271.7488
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018008
(v1.0)
RpiaNM_00907519895
37.386465.102682.6642
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018008
(v1.0)
RpiaNM_00907519895
368.769377.07
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018008
(v1.0)
RpiaNM_00907519895
38.32413.27890.6633
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018008
(v1.0)
RpiaNM_00907519895
74.122264.096949.0129
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018008
(v1.0)
RpiaNM_00907519895
149.73166.289
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018008
(v1.0)
RpiaNM_00907519895
27.743222.4835
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018008
(v1.0)
RpiaNM_00907519895
14.47533.6952
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018008
(v1.0)
10176H3092B08-3Mm.17905Rpia19895
U027445NAP016000-001Rpia;TC832311P47968U,F,23.24553.30053.67253.32843.47283.38843.404
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018008
(v1.0)
1418337_atMm.17905RpiaNM_009075.219895
290.65487.775443.05606.225463.675
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018008
(v1.0)
A_51_P157472RpiaNM_00907519895
11P1.0270.836P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018008
(v1.0)
Rpia19895
011021