DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018010
GeneRpl10a
SynonymsCsA-19
Nedd6
Desc.ribosomal protein L10A
LocusNM_011287 chr17:28465416-28467978(+)
DB links


Entrez 19896
MGI 1343877
Ensembl ENSMUSG00000037805
Vega OTTMUSG00000023382
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018537
(v2.0)
Rpl10aNM_01128719896
873.68334.90247.64749249.698870.8984907.54512.536.06065705.4175561.67
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018010
(v1.0)
Rpl10a19896
MGA0.9989
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018537
(v2.0)
Rpl10a19896
824/5220.1455396/522-0.5136115/5221.398316/5220.604847/522-1.3966472/522-0.7428
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018537
(v2.0)
Rpl10a19896
410/2330.3013193/233-0.38697/2332.2783268/2331.523112/233-2.1315122/233-1.5212
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018537
(v2.0)
Rpl10a19896
77.406919240.32
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018537
(v2.0)
Rpl10a19896
23.3610023.36
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018010
(v1.0)
Rpl10aNM_01128719896
36.27145.31879186.05604.941362.319
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018010
(v1.0)
Rpl10aNM_01128719896
0.04756820.2090540.6125220.826472.04487
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018010
(v1.0)
Rpl10aNM_01128719896
37.9251319.5155.80292
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018010
(v1.0)
Rpl10aNM_01128719896
37.01875.265394.52668
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018010
(v1.0)
Rpl10aNM_01128719896
0.2120820
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018010
(v1.0)
Rpl10aNM_01128719896
37.9471315.1384.9647
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018010
(v1.0)
Rpl10aNM_01128719896
172.253584.095488.904
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018010
(v1.0)
Rpl10aNM_01128719896
0.817510.790922
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018010
(v1.0)
Rpl10aNM_01128719896
5.65372537.529
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018010
(v1.0)
Rpl10aNM_01128719896
1.167760.344304
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018010
(v1.0)
21007L0824F08-3Mm.2424Rpl10a19896
Rpl10aTC8136863.27573.29663.68794.16534.1034.35394.3245
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018010
(v1.0)
1431177_a_atMm.482088Rpl10a19896
1587.45202.42044.7255794.254420.9
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018010
(v1.0)
A_52_P407086Rpl10aNM_01128719896
11P0.5580.229P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018010
(v1.0)
Rpl10a19896
86613117