DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018018
GeneRpl17
Synonyms
Desc.ribosomal protein L17
LocusNM_001002239 chr18:75160131-75163035(+)
DB links


Entrez 319195
MGI 2448270
Ensembl ENSMUSG00000062328
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018546
(v2.0)
Rpl17NM_001002239319195
1618.53432.109318.9450.71176.8410036.2732.779353.75141411479.6
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018018
(v1.0)
Rpl17319195
Major ZGA0.87064
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018546
(v2.0)
Rpl17319195
572/3660.131368/366-0.108135/3662.1258596/3662.027377/366-0.1888607/3660.1302
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018546
(v2.0)
Rpl17319195
276/1370.4946147/137-0.014598/1373.01343/1372.633310/137-1.624132/137-0.647
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018546
(v2.0)
Rpl17319195
65.630312751.68
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018546
(v2.0)
Rpl17319195
29.06038135.88
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018018
(v1.0)
Rpl17NM_001002239319195
449.172221.264335.853819.24534.44
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018018
(v1.0)
Rpl17FR041021,NM_001002239319195
216358578664654035932988805606
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018018
(v1.0)
Rpl17NM_001002239319195
469.651591.911241.404
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018018
(v1.0)
Rpl17NM_001002239319195
458.426219.042262.523
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018018
(v1.0)
Rpl17NM_001002239319195
0.9290390.869465
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018018
(v1.0)
Rpl17NM_001002239319195
469.924583.804287.926
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018018
(v1.0)
Rpl17NM_001002239319195
310.947791.009981.645
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018018
(v1.0)
Rpl17FR041021,NM_001002239319195
922913717706
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018018
(v1.0)
Rpl17NM_001002239319195
96.6902339.586
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018018
(v1.0)
Rpl17NM_001002239319195
00.0943437
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018018
(v1.0)
1423855_x_atMm.276337Rpl17NM_001002239.3319195
2096.3945.4518693351.3252455.775
0018018
(v1.0)
1435791_x_atMm.276337Rpl17NM_001002239.3319195
3643.151567.2752964.2257767.8754936.9
0018018
(v1.0)
1453752_atMm.276337Rpl17NM_001002239.3319195
00204.975532.525306.475
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018018
(v1.0)
A_52_P109109Rpl17NM_001002239319195
11P0.5140.151P
0018018
(v1.0)
A_52_P123268Rpl17NM_001002239319195
11P0.3950.0683P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018018
(v1.0)
Rpl17319195
53581113