DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018020
GeneRpl18a
Synonyms
Desc.ribosomal protein L18A
LocusNM_029751 chr8:73418621-73421342(-)
DB links


Entrez 76808
MGI 1924058
Ensembl ENSMUSG00000045128
Featureprotein-coding
GO(BP)
GO(MF)
  •   1 Terms
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018548
(v2.0)
Rpl18aNM_02975176808
786.79169.972213.1576290.153814.4484516.49718.86313.3273562.9074711.86
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018020
(v1.0)
Rpl18a76808
MGA0.985
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018548
(v2.0)
Rpl18a76808
747/553-0.0788375/553-0.675186/5532.0055679/5531.623196/5530.55791151/5530.4575
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018548
(v2.0)
Rpl18a76808
289/253-0.3195111/253-1.2965119/2532.4574355/2531.809716/253-1.8613134/253-1.5057
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018548
(v2.0)
Rpl18a76808
71.500321732.95
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018548
(v2.0)
Rpl18a76808
32.103712625.48
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018020
(v1.0)
Rpl18aNM_02975176808
72.71589.12459215.851563.064510.56
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018020
(v1.0)
Rpl18aFR330831,NM_02975176808
7201.4718177.952715.669580.987153.3
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018020
(v1.0)
Rpl18aNM_02975176808
76.0311287.7379.95513
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018020
(v1.0)
Rpl18aNM_02975176808
74.21389.032979.88998
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018020
(v1.0)
Rpl18aNM_02975176808
0.8619870.51347
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018020
(v1.0)
Rpl18aNM_02975176808
76.0752283.79610.847
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018020
(v1.0)
Rpl18aNM_02975176808
199.845543.661388.833
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018020
(v1.0)
Rpl18aNM_02975176808
33.917422.5484
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018020
(v1.0)
Rpl18aNM_02975176808
26.2706374.77
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018020
(v1.0)
Rpl18aNM_02975176808
5.578336.94754
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018020
(v1.0)
11322H3112B11-32510019J09Rik76808
U029936NAP097021-001TC924243,TC924243,TC924242,TC924241,TC924233,TC924226,TC924224,TC924223P02088U,F,23.21653.26213.62154.05483.92334.29224.1151
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018020
(v1.0)
1428152_a_atMm.485387Rpl18aNM_001111116.176808
10529.67519379969.07537934.07532466.475
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018020
(v1.0)
A_51_P446229Rpl18aNM_02975176808
11P1.1750.353P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018020
(v1.0)
Rpl18a76808
4521375