DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018029
GeneRpl27
Synonyms
Desc.ribosomal protein L27
LocusNM_011289 chr11:101303559-101306910(+)
DB links


Entrez 19942
MGI 98036
Ensembl ENSMUSG00000063316
Vega OTTMUSG00000002868
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018557
(v2.0)
Rpl27NM_01128919942
758.80757.90476.47512223.639938.352188.2490.6616.33301961.3022627.77
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018029
(v1.0)
Rpl2719942
MGA0.98669
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018557
(v2.0)
Rpl2719942
422/2730.1151250/273-0.242296/2732.0455252/2731.208316/273-1.9693129/273-1.6693
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018557
(v2.0)
Rpl2719942
243/1530.1537130/153-0.348693/1532.7882241/1531.96927/153-2.238381/153-1.4996
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018557
(v2.0)
Rpl2719942
51.45049951.97
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018557
(v2.0)
Rpl2719942
23.52216834.59
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018029
(v1.0)
Rpl27NM_01128919942
60.18834.47858166.61653.323352.664
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018029
(v1.0)
Rpl27NM_01128919942
1.475060.1542532.480592.496810.355959
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018029
(v1.0)
Rpl27NM_01128919942
62.9324277.5044.88623
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018029
(v1.0)
Rpl27NM_01128919942
61.42834.433614.71982
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018029
(v1.0)
Rpl27NM_01128919942
0.1564880.470468
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018029
(v1.0)
Rpl27NM_01128919942
62.969273.7035.17654
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018029
(v1.0)
Rpl27NM_01128919942
154.255630.809662.309
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018029
(v1.0)
Rpl27NM_01128919942
2.469642.09054
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018029
(v1.0)
Rpl27NM_01128919942
34.3652223.32
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018029
(v1.0)
Rpl27NM_01128919942
5.908435.6907
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018029
(v1.0)
7109H3042C11-3Mm.28985Rpl2719942
U043226NAP056265-1Rpl27;TC879909,TC879907Q9CSM4U,F,22.15822.43692.83352.85072.49572.63632.5074
0018029
(v1.0)
21739L0907E08-3Rpl2719942
U043226NAP033910-1Rpl27;TC873033Q9CSM4U,F,23.37283.33753.39643.26853.40383.35813.3331
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018029
(v1.0)
1448217_a_atMm.340658Rpl27NM_011289.319942
300.22537.975292.352034.61359.8
0018029
(v1.0)
1416099_atMm.340658Rpl27NM_011289.319942
1029.175228.975890.156580.0755020.925
0018029
(v1.0)
1453096_x_atMm.340658Rpl27NM_011289.319942
511.82571515.8252751.91694.65
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018029
(v1.0)
A_51_P168738Rpl27NM_01128919942
11P1.0540.691P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018029
(v1.0)
Rpl2719942
233364