DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018031
GeneRpl28
SynonymsD7Wsu21e
Desc.ribosomal protein L28
LocusNM_009081 chr7:4744567-4746149(+)
DB links


Entrez 19943
MGI 101839
Ensembl ENSMUSG00000030432
Vega OTTMUSG00000022993
Featureprotein-coding
GO(BP)
GO(MF)
  •   1 Terms
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018559
(v2.0)
Rpl28NM_00908119943
1814.15110.70310.5613321.54414.6855849.83160.39214.4605411.1417033.76
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018031
(v1.0)
Rpl2819943
Major ZGA0.96655
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018559
(v2.0)
Rpl2819943
779/4600.2467446/460-0.1604199/4602.3619605/4601.7211114/4600.0448656/460-0.0871
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018559
(v2.0)
Rpl2819943
294/1730.2509167/173-0.166195/1732.6536236/1731.764610/173-1.951784/173-1.6242
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018559
(v2.0)
Rpl2819943
57.243316135.55
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018559
(v2.0)
Rpl2819943
24.23729226.34
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018031
(v1.0)
Rpl28NM_00908119943
115.067.34031239.275287.673111.536
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018031
(v1.0)
Rpl28NM_00908119943
0.27602700.1289540.7077870.368138
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018031
(v1.0)
Rpl28NM_00908119943
120.305663.4558.00844
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018031
(v1.0)
Rpl28NM_00908119943
117.437.2666110.7242
SOLiD_NMNR_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018031
(v1.0)
Rpl28NM_00908119943
120.375654.36811.762
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018031
(v1.0)
Rpl28NM_00908119943
221.532277.76284.821
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018031
(v1.0)
Rpl28NM_00908119943
0.700230.725526
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018031
(v1.0)
Rpl28NM_00908119943
45.1337235.274
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018031
(v1.0)
Rpl28NM_00908119943
5.3488111.2234
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018031
(v1.0)
11319H3112A10-3Rpl2819943
U007620NAP109003-1TC879796,TC879791P41105U,F,23.01673.11733.25313.82483.53513.86613.8416
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018031
(v1.0)
1416074_a_atMm.379002Rpl28NM_009081.219943
1265.9263.91029.84073.5753377.875
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018031
(v1.0)
A_51_P339103Rpl28NM_00908119943
11P0.8430.362P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018031
(v1.0)
Rpl2819943
4329102