DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018034
GeneRpl30
Synonyms
Desc.ribosomal protein L30
LocusNM_001163485 chr15:34370263-34373031(-)
NM_009083 chr15:34370263-34372980(-)
DB links


Entrez 19946
MGI 98037
Ensembl ENSMUSG00000058600
Vega OTTMUSG00000023325
Featureprotein-coding
GO(BP)
GO(MF)
  •   1 Terms
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018562
(v2.0)
Rpl30NM_001163485,NM_00908319946
1231.6659.48147.77544414.31189.733763.15262.0596.37113962.9284225.63
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018034
(v1.0)
Rpl3019946
MGA0.96153
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018562
(v2.0)
Rpl3019946
597/3510.2528408/3510.1006222/3512.8976674/3512.264414/351-2.5077148/351-1.8346
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018562
(v2.0)
Rpl3019946
311/1810.2668189/181-0.0535205/1813.6941590/1813.01851/181-4.474941/181-2.6972
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018562
(v2.0)
Rpl3019946
52.80413140.31
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018562
(v2.0)
Rpl3019946
12.18348813.84
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018034
(v1.0)
Rpl30NM_001163485,NM_00908319946
61.82545.39088308.659826.364189.272
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018034
(v1.0)
Rpl30NM_001163485,NM_00908319946
7.451230.59826126.713155.45066.88892
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018034
(v1.0)
Rpl30NM_001163485,NM_00908319946
64.6442450.4325.88157
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018034
(v1.0)
Rpl30NM_001163485,NM_00908319946
63.09915.336754.70281
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018034
(v1.0)
Rpl30NM_001163485,NM_00908319946
0.6070390.343272
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018034
(v1.0)
Rpl30NM_001163485,NM_00908319946
64.6817444.2625.15788
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018034
(v1.0)
Rpl30NM_001163485,NM_00908319946
285.77797.887663.474
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018034
(v1.0)
Rpl30NM_001163485,NM_00908319946
54.851654.913
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018034
(v1.0)
Rpl30NM_001163485,NM_00908319946
66.7856558.439
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018034
(v1.0)
Rpl30NM_001163485,NM_00908319946
0.3306840.853121
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018034
(v1.0)
4960G0116F03-3Mm.3487Rpl3019946
U036078NAP106285-1Rpl30;TC852770U,F,21.96761.98991.91082.40012.42362.39362.3205
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018034
(v1.0)
1418273_a_atMm.439801Rpl3019946
1626.475251.9251849.257596.65657
0018034
(v1.0)
1438076_atMm.439801Rpl3019946
00092.850
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018034
(v1.0)
A_51_P268914Rpl30NM_00908319946
11P0.720.188P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018034
(v1.0)
Rpl3019946
120120