DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018041
GeneRpl35a
Synonyms
Desc.ribosomal protein L35A
LocusNM_001130485 chr16:33056539-33060274(+)
NM_001130484 chr16:33056568-33060274(+)
NM_021338 chr16:33056600-33060274(+)
DB links


Entrez 57808
MGI 1928894
Ensembl ENSMUSG00000060636
Vega OTTMUSG00000024790
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018569
(v2.0)
Rpl35aNM_001130484,NM_001130485,NM_02133857808
1426.9640.07278.26671478.581419.123304.14731.6784.22871260.993779.12
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018041
(v1.0)
Rpl35a57808
Major ZGA0.9785
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018569
(v2.0)
Rpl35a57808
636/3770.2411430/3770.0734193/3772.5969599/3771.992181/377-0.1589495/377-0.2059
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018569
(v2.0)
Rpl35a57808
316/1710.3712190/1710.0356177/1713.56533/1712.953122/171-0.8712164/171-0.6548
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018569
(v2.0)
Rpl35a57808
37.486413727.36
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018569
(v2.0)
Rpl35a57808
13.12149513.81
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018041
(v1.0)
Rpl35aNM_001130484,NM_001130485,NM_02133857808
41.65015.77825355.671985.209517.545
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018041
(v1.0)
Rpl35aNM_001130484,NM_001130485,NM_02133857808
3.41860.2172864.0412722.17988.26425
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018041
(v1.0)
Rpl35aNM_001130484,NM_001130485,NM_02133857808
43.549521.8556.3042
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018041
(v1.0)
Rpl35aNM_001130484,NM_001130485,NM_02133857808
42.50825.720243.06335
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018041
(v1.0)
Rpl35aNM_001130484,NM_001130485,NM_02133857808
0.2206730.140428
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018041
(v1.0)
Rpl35aNM_001130484,NM_001130485,NM_02133857808
43.5743514.7073.35978
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018041
(v1.0)
Rpl35aNM_001130484,NM_001130485,NM_02133857808
329.296951.258873.599
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018041
(v1.0)
Rpl35aNM_001130484,NM_001130485,NM_02133857808
15.523311.45
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018041
(v1.0)
Rpl35aNM_001130484,NM_001130485,NM_02133857808
13.6574249.6
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018041
(v1.0)
Rpl35aNM_001130484,NM_001130485,NM_02133857808
0.3448430.711719
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018041
(v1.0)
12130H3135B02-3Rpl35a57808
U017033NAP097766-001TC891772,TC891770,TC891769,TC891767,TC891766,TC891765,TC891764,TC891763O55142U,F,23.31783.20263.59544.23325.11224.90745.0302
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018041
(v1.0)
A_51_P509107Rpl35aNM_02133857808
11P0.4930.0896P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018041
(v1.0)
Rpl35a57808
130130