DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0018051

Gene

Rpl4

Synonyms

Description

ribosomal protein L4

Locus

NM_024212 UCSC: chr9:64021194-64026369(+) OLP: chr9:64021194-64026369(+)

DB links

Entrez 67891
MGI 1915141
Ensembl ENSMUSG00000032399

Feature

protein-coding

GO_BP

1 Terms

GO_MF

2 Terms

GO_CC

7 Terms

KEGG

1 Terms

see DBTMEE:2018579 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0018051 (v1.0)	Rpl4	NM_024212	67891	231.131	52.0642	355.097	896.817	759.394

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0018051 (v1.0)	Rpl4	NM_024212	67891	241.669	372.198	56.8031

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0018051 (v1.0)	Rpl4	NM_024212	67891	235.893	51.5414	53.8006

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0018051 (v1.0)	Rpl4	NM_024212	67891	241.809	367.1	59.0067

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0018051 (v1.0)	Rpl4	NM_024212	67891	328.765	865.913	757.244

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0018051 (v1.0)	Rpl4	NM_024212	67891	217.985	291.149

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0018051 (v1.0)	Rpl4	NM_024212	67891	74.7733	24.0522

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0018051 (v1.0)	3747	C0876F12-3	Mm.10706	2010004J23Rik	67891	U010610	NAP092425-001	2010004J23Rik;	TC873550,TC873535	Q9CSM5	U,F,2	3.8224	4.0289	4.1507	4.9493	4.5991	4.9057	4.7279
0018051 (v1.0)	7350	H3046F11-3		2010004J23Rik	67891	U010610	NAP092425-001	2010004J23Rik;	TC873558,TC873536,TC873535	Q9CSM5	U,F,2	3.789	3.7159	3.9065	4.4845	4.0306	4.3691	4.197
0018051 (v1.0)	18695	L0223A11-3	Mm.10706	2010004J23Rik	67891							3.4501	3.5827	3.703	4.4328	4.4735	4.614	4.4759

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0018051 (v1.0)	1425183_a_at	Mm.280083	Rpl4	NM_024212.4	67891	2287	920.375	2440.93	9514.6	7477.9

N/A

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0018051 (v1.0)	Rpl4	67891	14	18	8	42	35	18