DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0018053

Gene

Rpl5

Synonyms

U21RNA

Description

ribosomal protein L5

Locus

NM_016980 UCSC: chr5:108329547-108338024(+) OLP: chr5:108329547-108338024(+)

DB links

Entrez 100503670
MGI 102854
Ensembl ENSMUSG00000058558
Vega OTTMUSG00000028907

Feature

protein-coding

GO_BP

3 Terms

GO_MF

5 Terms

GO_CC

6 Terms

KEGG

1 Terms

see DBTMEE:2018581 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0018053 (v1.0)	Rpl5	NM_016980	100503670	70.0738	3.84565	85.2267	346.254	275.348

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0018053 (v1.0)	Rpl5	NM_016980	100503670	73.2686	132.535	4.19568

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0018053 (v1.0)	Rpl5	NM_016980	100503670	71.5174	3.80703	4.8482

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0018053 (v1.0)	Rpl5	NM_016980	100503670	73.3112	130.719	5.31734

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0018053 (v1.0)	Rpl5	NM_016980	100503670	78.9066	334.322	316.774

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0018053 (v1.0)	Rpl5	NM_016980	100503670	37.2904	90.1082

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0018053 (v1.0)	Rpl5	NM_016980	100503670	1.09507	1.99246

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0018053 (v1.0)	4881	G0110H07-3	Mm.4419	Rpl5	19983	U029154	NAP095621-001		TC902763,TC902753,TC902727,TC902723,TC902721,TC893606	P47962	U,F,2	3.5357	3.6376	4.0679	4.6701	5.0095	5.1126	4.976
0018053 (v1.0)	20578	L0800E02-3	Mm.153384	Rpl5	19983	U005936	NAP121362-001	Rpl5;		P47962	U,F,2	2.6261	2.8601	2.9058	2.8055	2.7658	2.7675	2.9254

N/A

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0018053 (v1.0)	A_51_P183732	Rpl5	NM_016980	100503670	1	1	P	0.333	0.0589	P

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0018053 (v1.0)	Rpl5	100503670	5	8	5	7	9	8