DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018053
GeneRpl5
SynonymsU21RNA
Desc.ribosomal protein L5
LocusNM_016980 chr5:108329547-108338024(+)
DB links


Entrez 100503670
MGI 102854
Ensembl ENSMUSG00000058558
Vega OTTMUSG00000028907
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018581
(v2.0)
Rpl5NM_016980100503670
362.40367.45075.54569114.559499.2591025.27386.4546.50895457.8061100.15
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018053
(v1.0)
Rpl5100503670
MGA0.93404
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018581
(v2.0)
Rpl5100503670
605/3670.2078409/3670.04117/3671.9171350/3671.2571116/3670.3922673/3670.2748
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018581
(v2.0)
Rpl5100503670
285/1560.3546175/1560.0493112/1563.0278331/1562.397839/1560.0563188/156-0.3278
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018581
(v2.0)
Rpl5100503670
53.10112442.82
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018581
(v2.0)
Rpl5100503670
14.49158117.89
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018053
(v1.0)
Rpl5NM_016980100503670
70.07383.8456585.2267346.254275.348
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018053
(v1.0)
Rpl5NM_016980100503670
0.8653950.2907051.797994.780887.98458
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018053
(v1.0)
Rpl5NM_016980100503670
73.2686132.5354.19568
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018053
(v1.0)
Rpl5NM_016980100503670
71.51743.807034.8482
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018053
(v1.0)
Rpl5NM_016980100503670
0.2953570.406017
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018053
(v1.0)
Rpl5NM_016980100503670
73.3112130.7195.31734
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018053
(v1.0)
Rpl5NM_016980100503670
78.9066334.322316.774
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018053
(v1.0)
Rpl5NM_016980100503670
4.728894.57066
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018053
(v1.0)
Rpl5NM_016980100503670
37.290490.1082
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018053
(v1.0)
Rpl5NM_016980100503670
1.095071.99246
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018053
(v1.0)
4881G0110H07-3Mm.4419Rpl519983
U029154NAP095621-001TC902763,TC902753,TC902727,TC902723,TC902721,TC893606P47962U,F,23.53573.63764.06794.67015.00955.11264.976
0018053
(v1.0)
20578L0800E02-3Mm.153384Rpl519983
U005936NAP121362-001Rpl5;P47962U,F,22.62612.86012.90582.80552.76582.76752.9254
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018053
(v1.0)
A_51_P183732Rpl5NM_016980100503670
11P0.3330.0589P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018053
(v1.0)
Rpl5100503670
585798