DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018055
GeneRpl7
SynonymsRpl7a
Surf-3
Desc.ribosomal protein L7
LocusNM_011291 chr1:16091376-16094514(-)
DB links


Entrez 19989
MGI 98073
Ensembl ENSMUSG00000043716
Vega OTTMUSG00000016936
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018583
(v2.0)
Rpl7NM_01129119989
789.68169.72017.72494459.9971883.455591.16980.6197.219871750.376408.49
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018055
(v1.0)
Rpl719989
MGA0.99847
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018583
(v2.0)
Rpl719989
920/4410.547670/4410.48621291/4415.11273272/4414.214886/441-0.2975546/441-0.2905
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018583
(v2.0)
Rpl719989
555/1821.0915345/1820.8031960/1825.90852049/1824.805140/182-0.1251335/1820.2795
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018583
(v2.0)
Rpl719989
73.891719138.69
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018583
(v2.0)
Rpl719989
27.188713719.85
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018055
(v1.0)
Rpl7NM_01129119989
72.44835.344342.6431306.78699.714
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018055
(v1.0)
Rpl7NM_01129119989
2.888270.31966510.194834.050426.2308
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018055
(v1.0)
Rpl7NM_01129119989
75.7513288.7955.83042
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018055
(v1.0)
Rpl7NM_01129119989
73.94085.290355.33437
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018055
(v1.0)
Rpl7NM_01129119989
0.3246250.163818
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018055
(v1.0)
Rpl7NM_01129119989
75.7953284.8395.85056
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018055
(v1.0)
Rpl7NM_01129119989
317.2341261.751208.69
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018055
(v1.0)
Rpl7NM_01129119989
33.682146.9959
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018055
(v1.0)
Rpl7NM_01129119989
2.47894198.382
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018055
(v1.0)
Rpl7NM_01129119989
0.2862180
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018055
(v1.0)
1323C0199C02-3Mm.37835Rpl719989
3.37483.33653.80894.4944.90154.86144.8496
0018055
(v1.0)
19320L0265G06-3Mm.37835Rpl719989
U021140NAP099942-001TC897011,TC897010,TC897004,TC897001,TC896992P14148U,F,22.91023.00773.87824.42574.60944.68374.6225
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018055
(v1.0)
1426162_a_atMm.397450Rpl719989
568.3547.25631.2754257.052984.6
0018055
(v1.0)
1415979_x_atMm.397450Rpl719989
1105.57579.551498.8257079.3754708.65
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018055
(v1.0)
A_52_P346326Rpl7NM_01129119989
11P0.5660.184P
0018055
(v1.0)
A_52_P455580Rpl7NM_01129119989
11P0.4180.0726P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018055
(v1.0)
Rpl719989
13752110.510