DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018061
GeneRplp1
Synonymsacidic ribosomal phosphoprotein P1
Desc.ribosomal protein, large, P1
LocusNM_018853 chr9:61761090-61762317(-)
DB links


Entrez 56040
MGI 1927099
Ensembl ENSMUSG00000007892
Featureprotein-coding
GO(BP)
  •   1 Terms
GO(MF)
  •   1 Terms
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018589
(v2.0)
Rplp1NM_01885356040
3764.1833.208413.4455924.1332148.129346.831533.4116.64162099.4911529.5
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018061
(v1.0)
Rplp156040
Major ZGA0.99982
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018589
(v2.0)
Rplp156040
635/507-0.1877396/507-0.4716106/5071.3226278/5070.462446/507-1.3853303/507-1.3377
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018589
(v2.0)
Rplp156040
264/188-0.0229166/188-0.294103/1882.6567256/1881.763110/188-2.06976/188-1.8852
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018589
(v2.0)
Rplp156040
84.348316351.75
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018589
(v2.0)
Rplp156040
17.62158820.02
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018061
(v1.0)
Rplp1NM_01885356040
34.49779.31992687.5551491.421085.44
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018061
(v1.0)
Rplp1FR312750,FR401296,NM_01885356040
9.4396163.274208.92343.912287.406
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018061
(v1.0)
Rplp1NM_01885356040
36.07051376.610.1682
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018061
(v1.0)
Rplp1NM_01885356040
35.20849.2263412.3045
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018061
(v1.0)
Rplp1FR312750,FR401296,NM_01885356040
64.22891.19323
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018061
(v1.0)
Rplp1NM_01885356040
36.09151357.7513.4952
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018061
(v1.0)
Rplp1NM_01885356040
636.5691440.021458.38
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018061
(v1.0)
Rplp1FR312750,FR401296,NM_01885356040
340.192300.923
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018061
(v1.0)
Rplp1NM_01885356040
4.11034867.948
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018061
(v1.0)
Rplp1NM_01885356040
18.132134.1686
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018061
(v1.0)
10989H3106E11-3Mm.3158Rplp156040
U004624NAP002417-002TC9199132.89692.91732.85152.96442.85092.9222.9669
0018061
(v1.0)
12315H3140H04-3Mm.3158Rplp156040
TC940017,TC940016,TC940015,TC940014,TC940012,TC940010,TC940006,TC940005,TC940002,TC940001,TC940000,TC939999,TC939993,TC939992,TC939990,TC939985,TC939984,TC939981,TC939979,TC939974U,F,24.23983.93154.91575.88515.18745.46665.161
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018061
(v1.0)
1416277_a_atMm.3158Rplp1NM_018853.356040
884.375121.61770.356274.0253971.525
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018061
(v1.0)
A_51_P219603Rplp1NM_01885356040
11P0.5670.111P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018061
(v1.0)
Rplp156040
112469