DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018085
GeneRps13
Synonyms
Desc.ribosomal protein S13
LocusNM_026533 chr7:123475021-123477704(-)
DB links


Entrez 68052
MGI 1915302
Ensembl ENSMUSG00000090862
Featureprotein-coding
GO(BP)
  •   1 Terms
      negative regulation of RNA splicing (GO:0033119)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018613
(v2.0)
Rps13NM_02653368052
1065.4275.637614.3709897.6152428.132974.22507.94618.97972468.493473.5
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018085
(v1.0)
Rps1368052
Major ZGA0.9913
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018613
(v2.0)
Rps1368052
547/384-0.0024410/384-0.0216156/3842.2658475/3841.63179/384-3.220857/384-3.3173
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018613
(v2.0)
Rps1368052
248/1640.0833169/164-0.0724151/1643.3885450/1642.76872/164-3.75121/164-3.4729
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018613
(v2.0)
Rps1368052
65.835312951.04
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018613
(v2.0)
Rps1368052
20.43438224.92
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018085
(v1.0)
Rps13NM_02653368052
78.64799.85655667.7731688.42368.141
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018085
(v1.0)
Rps13NM_02653368052
0.6642130.0522751.899555.44243.3329
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018085
(v1.0)
Rps13NM_02653368052
82.2336389.63610.7537
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018085
(v1.0)
Rps13NM_02653368052
80.26819.7575814.1215
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018085
(v1.0)
Rps13NM_02653368052
0.05313780.112314
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018085
(v1.0)
Rps13NM_02653368052
82.2814384.315.4879
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018085
(v1.0)
Rps13NM_02653368052
618.2541630.231712.24
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018085
(v1.0)
Rps13NM_02653368052
5.383824.80167
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018085
(v1.0)
Rps13NM_02653368052
1.07056288.29
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018085
(v1.0)
Rps13NM_02653368052
6.343538.6808
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018085
(v1.0)
2940C0455E05-3Mm.14798Rps1368052
3.46713.43373.82984.34184.34434.44854.4264
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018085
(v1.0)
1415912_a_atMm.425541Rps1368052
330.2750353.05865.55580.475
0018085
(v1.0)
1448142_x_atMm.425541Rps1368052
688.6750715.81398.51107.975
0018085
(v1.0)
1438794_x_atMm.425541Rps1368052
2638.925106.42098.2256334.4753839.575
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018085
(v1.0)
A_51_P327469Rps13NM_02653368052
11P0.5130.0945P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018085
(v1.0)
Rps1368052
4857156