DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018091
GeneRps16
Synonyms
Desc.ribosomal protein S16
LocusNM_013647 chr7:29135708-29137717(+)
DB links


Entrez 20055
MGI 98118
Ensembl ENSMUSG00000037563
Vega OTTMUSG00000022980
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018619
(v2.0)
Rps16NM_01364720055
1535.44102.25142.7843468.8311183.557445.64561.97244.93221373.458406.66
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018091
(v1.0)
Rps1620055
Major ZGA0.99508
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018619
(v2.0)
Rps1620055
620/464-0.0945375/464-0.4224124/4641.6716386/4641.061727/464-2.0057194/464-1.8493
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018619
(v2.0)
Rps1620055
333/243-0.058181/243-0.5385114/2432.4514368/2431.919110/243-2.432172/243-2.3301
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018619
(v2.0)
Rps1620055
76.973115948.41
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018619
(v2.0)
Rps1620055
33.750111429.61
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018091
(v1.0)
Rps16NM_01364720055
106.30329.6529349.503823.463402.396
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018091
(v1.0)
Rps16NM_01364720055
0.6642230.1589921.779593.423820.882588
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018091
(v1.0)
Rps16NM_01364720055
111.149561.52432.3519
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018091
(v1.0)
Rps16NM_01364720055
108.49329.355133.4404
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018091
(v1.0)
Rps16NM_01364720055
0.1612950.354741
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018091
(v1.0)
Rps16NM_01364720055
111.214553.83436.6763
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018091
(v1.0)
Rps16NM_01364720055
323.585795.086951.696
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018091
(v1.0)
Rps16FR191950,NM_013647,NR_02812920055
55516.279673.1
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018091
(v1.0)
Rps16NM_01364720055
18.6207428.99
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018091
(v1.0)
Rps16NM_01364720055
250.195145.853
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018091
(v1.0)
1416404_s_atMm.702Rps16NM_013647.220055
2338.81067.652633.610509.1257142.95
0018091
(v1.0)
1437196_x_atMm.702Rps16NM_013647.220055
13014.37510.0514781.754194829515.475
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018091
(v1.0)
A_51_P416995Rps16NM_01364720055
11P0.9220.565P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018091
(v1.0)
Rps1620055
57761515