DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018106
GeneRps27l
Synonyms
Desc.ribosomal protein S27-like
LocusNM_026467 chr9:66793925-66797316(+)
DB links


Entrez 67941
MGI 1915191
Ensembl ENSMUSG00000036781
Vega OTTMUSG00000033768
Featureprotein-coding
GO(BP)
  •   7 Terms
      DNA repair (GO:0006281)
      translation (GO:0006412)
      activation of cysteine-type endopeptidase activity involved in apoptotic process (GO:0006919)
      response to DNA damage stimulus (GO:0006974)
      mitotic cell cycle G1/S transition DNA damage checkpoint (GO:0031571)
      intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (GO:0042771)
      positive regulation of translation (GO:0045727)
GO(MF)
  •   4 Terms
      structural constituent of ribosome (GO:0003735)
      translation activator activity (GO:0008494)
      cysteine-type endopeptidase activator activity involved in apoptotic process (GO:0008656)
      metal ion binding (GO:0046872)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018634
(v2.0)
Rps27lNM_02646767941
203.73725.1925103.226119.69174.2181089.81104.556100.347112.6891397.83
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018106
(v1.0)
Rps27l67941
MGA0.99749
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018634
(v2.0)
Rps27l67941
531/2950.3342345/2950.1093197/2952.9677369/2951.645867/295-0.0795440/295-0.0225
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018634
(v2.0)
Rps27l67941
285/1360.5512158/1360.0994194/1363.9976358/1362.705219/136-0.751392/136-1.1503
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018634
(v2.0)
Rps27l67941
41.312910439.72
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018634
(v2.0)
Rps27l67941
14.6217619.24
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018106
(v1.0)
Rps27lNM_02646767941
26.169571.185489.2823120.87974.3462
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018106
(v1.0)
Rps27lNM_02646767941
23.999753.948361.572976.009856.9906
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018106
(v1.0)
Rps27lNM_02646767941
27.362674.508677.6648
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018106
(v1.0)
Rps27lNM_02646767941
26.708670.470774.0243
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018106
(v1.0)
Rps27lNM_02646767941
76.924393.2806
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018106
(v1.0)
Rps27lNM_02646767941
27.378573.488181.1874
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018106
(v1.0)
Rps27lNM_02646767941
82.6615116.71477.7471
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018106
(v1.0)
Rps27lNM_02646767941
75.188364.6607
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018106
(v1.0)
Rps27lNM_02646767941
17.4359419.715
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018106
(v1.0)
Rps27lNM_02646767941
220.112456.352
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018106
(v1.0)
5606H3003G09-3Mm.30120Rps27l67941
U010664NAP007367-001TC934972,TC934971,TC934969U,F,24.32844.4153.71814.15394.24014.34544.4536
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018106
(v1.0)
1450925_a_atMm.30120Rps27lNM_026467.367941
576.875996.3251311.9751002.9251609.375
0018106
(v1.0)
1435429_x_atMm.30120Rps27lNM_026467.367941
667.8251088.451506.31392.81459.225
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018106
(v1.0)
A_51_P246903Rps27lNM_02646767941
11P0.9220.563P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018106
(v1.0)
Rps27l67941
300300